Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH6P52701 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.15□□□□□ -1.59
MSH6P52701 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.15□□□□□ -1.59
MSH6P52701 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.15□□□□□ -1.59
MSH6P52701 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
MSH6P52701 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH6P52701 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH6P52701 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH6P52701 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH6P52701 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH6P52701 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
MSH6P52701 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH6P52701 OR10J6P-201ENST00000289731 930 ntBASIC5.14□□□□□ -1.59
MSH6P52701 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
MSH6P52701 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.14□□□□□ -1.59
MSH6P52701 RNA5SP52-201ENST00000362448 134 ntBASIC5.14□□□□□ -1.59
MSH6P52701 RNU4-35P-201ENST00000362588 141 ntBASIC5.14□□□□□ -1.59
MSH6P52701 RNA5SP374-201ENST00000362939 125 ntBASIC5.14□□□□□ -1.59
MSH6P52701 RN7SKP284-201ENST00000411002 343 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AL160275.2-201ENST00000412010 394 ntBASIC5.14□□□□□ -1.59
MSH6P52701 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.14□□□□□ -1.59
MSH6P52701 OR2X1P-201ENST00000421144 687 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AL035458.1-201ENST00000433096 585 ntBASIC5.14□□□□□ -1.59
MSH6P52701 RPL21P110-201ENST00000433345 446 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH6P52701 AC127537.2-201ENST00000439258 465 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AC073587.1-201ENST00000447093 876 ntBASIC5.14□□□□□ -1.59
MSH6P52701 RPS17P13-201ENST00000448974 407 ntBASIC5.14□□□□□ -1.59
MSH6P52701 MRPL35P4-201ENST00000453682 566 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AC006511.1-201ENST00000470614 315 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AC020893.1-201ENST00000502452 580 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AC111000.5-201ENST00000506559 1178 ntBASIC5.14□□□□□ -1.59
MSH6P52701 SNORA70.18-201ENST00000516696 98 ntBASIC5.14□□□□□ -1.59
MSH6P52701 IGKV2-38-201ENST00000517443 247 ntBASIC5.14□□□□□ -1.59
MSH6P52701 OR7E13P-201ENST00000526052 910 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH6P52701 AC006504.3-201ENST00000586818 523 ntBASIC5.14□□□□□ -1.59
MSH6P52701 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH6P52701 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH6P52701 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.13□□□□□ -1.59
MSH6P52701 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH6P52701 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
MSH6P52701 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MSH6P52701 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MSH6P52701 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH6P52701 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MSH6P52701 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH6P52701 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.13□□□□□ -1.59
MSH6P52701 AL671855.1-201ENST00000446875 1203 ntBASIC5.13□□□□□ -1.59
MSH6P52701 TMED11P-201ENST00000479478 690 ntBASIC5.13□□□□□ -1.59
MSH6P52701 RPL7P24-201ENST00000493052 752 ntBASIC5.13□□□□□ -1.59
MSH6P52701 AC017037.1-201ENST00000508460 471 ntBASIC5.13□□□□□ -1.59
MSH6P52701 PHBP14-201ENST00000512887 367 ntBASIC5.13□□□□□ -1.59
MSH6P52701 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
MSH6P52701 AC079684.1-201ENST00000621405 437 ntBASIC5.13□□□□□ -1.59
MSH6P52701 AC006386.2-201ENST00000624491 75 ntBASIC5.13□□□□□ -1.59
MSH6P52701 AC012005.1-201ENST00000624575 75 ntBASIC5.13□□□□□ -1.59
MSH6P52701 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.13□□□□□ -1.59
MSH6P52701 AC119674.1-212ENST00000641155 993 ntBASIC5.13□□□□□ -1.59
MSH6P52701 AP000553.6-201ENST00000641242 118 ntBASIC5.13□□□□□ -1.59
MSH6P52701 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH6P52701 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH6P52701 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
MSH6P52701 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.12□□□□□ -1.59
MSH6P52701 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH6P52701 AL024507.1-201ENST00000412741 274 ntBASIC5.12□□□□□ -1.59
MSH6P52701 OR1AA1P-201ENST00000419597 916 ntBASIC5.12□□□□□ -1.59
MSH6P52701 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.12□□□□□ -1.59
MSH6P52701 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.12□□□□□ -1.59
MSH6P52701 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.12□□□□□ -1.59
MSH6P52701 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
MSH6P52701 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.12□□□□□ -1.59
MSH6P52701 AC068020.1-201ENST00000594215 661 ntBASIC5.12□□□□□ -1.59
MSH6P52701 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.12□□□□□ -1.59
MSH6P52701 AL591424.2-201ENST00000617023 128 ntBASIC5.12□□□□□ -1.59
MSH6P52701 AL773545.4-201ENST00000637262 310 ntBASIC5.12□□□□□ -1.59
MSH6P52701 AL513478.4-201ENST00000641636 310 ntBASIC5.12□□□□□ -1.59
MSH6P52701 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH6P52701 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
MSH6P52701 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH6P52701 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.12□□□□□ -1.59
MSH6P52701 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
MSH6P52701 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH6P52701 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH6P52701 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MSH6P52701 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MSH6P52701 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MSH6P52701 RPS24P12-201ENST00000402084 394 ntBASIC5.11□□□□□ -1.59
MSH6P52701 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.11□□□□□ -1.59
MSH6P52701 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.11□□□□□ -1.59
MSH6P52701 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.11□□□□□ -1.59
MSH6P52701 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
MSH6P52701 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.11□□□□□ -1.59
MSH6P52701 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.11□□□□□ -1.59
MSH6P52701 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.11□□□□□ -1.59
MSH6P52701 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.11□□□□□ -1.59
MSH6P52701 Vault.1-201ENST00000516474 102 ntBASIC5.11□□□□□ -1.59
MSH6P52701 AC008802.1-201ENST00000519121 791 ntBASIC5.11□□□□□ -1.59
MSH6P52701 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.11□□□□□ -1.59
MSH6P52701 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms