Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.82□□□□□ -1.48
MRE11P49959 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 OR5AN2P-201ENST00000534535 896 ntBASIC5.82□□□□□ -1.48
MRE11P49959 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.82□□□□□ -1.48
MRE11P49959 AC092851.1-201ENST00000535964 478 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.82□□□□□ -1.48
MRE11P49959 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 AL121766.1-201ENST00000547436 487 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.82□□□□□ -1.48
MRE11P49959 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.82□□□□□ -1.48
MRE11P49959 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 VN1R82P-201ENST00000601481 356 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC096553.1-201ENST00000605169 829 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 AC005332.10-201ENST00000612725 619 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC116165.2-201ENST00000616705 206 ntBASIC5.82□□□□□ -1.48
MRE11P49959 VN1R7P-201ENST00000619242 903 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC005086.4-201ENST00000623065 213 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 AC092192.1-201ENST00000633154 1018 ntBASIC5.82□□□□□ -1.48
MRE11P49959 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 AC073055.1-201ENST00000456901 1621 ntBASIC5.81□□□□□ -1.48
MRE11P49959 BTBD10P1-201ENST00000549824 1352 ntBASIC5.81□□□□□ -1.48
MRE11P49959 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MRE11P49959 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
MRE11P49959 AL672167.1-203ENST00000641299 2975 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC000367.1-201ENST00000452711 1766 ntBASIC5.81□□□□□ -1.48
MRE11P49959 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
MRE11P49959 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 RNU1-83P-201ENST00000363426 164 ntBASIC5.81□□□□□ -1.48
MRE11P49959 RNA5SP28-201ENST00000363841 119 ntBASIC5.81□□□□□ -1.48
MRE11P49959 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.81□□□□□ -1.48
MRE11P49959 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 SNORA51.8-201ENST00000384234 132 ntBASIC5.81□□□□□ -1.48
MRE11P49959 RNU6-517P-201ENST00000384362 110 ntBASIC5.81□□□□□ -1.48
MRE11P49959 MIR142-201ENST00000384835 87 ntBASIC5.81□□□□□ -1.48
MRE11P49959 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MRE11P49959 RNU6-757P-201ENST00000410334 100 ntBASIC5.81□□□□□ -1.48
MRE11P49959 RPL21P108-201ENST00000413857 481 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC004690.1-201ENST00000418216 328 ntBASIC5.81□□□□□ -1.48
MRE11P49959 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 TPTE2P6-202ENST00000445572 1007 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 VDAC2P4-201ENST00000452925 711 ntBASIC5.81□□□□□ -1.48
MRE11P49959 CDC42P1-201ENST00000456658 548 ntBASIC5.81□□□□□ -1.48
MRE11P49959 RPL23AP37-201ENST00000479658 549 ntBASIC5.81□□□□□ -1.48
MRE11P49959 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.81□□□□□ -1.48
MRE11P49959 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.81□□□□□ -1.48
MRE11P49959 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MRE11P49959 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.81□□□□□ -1.48
MRE11P49959 RNU2-30P-201ENST00000516209 141 ntBASIC5.81□□□□□ -1.48
MRE11P49959 RNA5SP360-201ENST00000516555 118 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.81□□□□□ -1.48
MRE11P49959 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 AL049870.4-201ENST00000555741 486 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 NDUFB4P11-201ENST00000560510 395 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC095057.3-201ENST00000567102 1157 ntBASIC5.81□□□□□ -1.48
MRE11P49959 MIR4284-201ENST00000578924 81 ntBASIC5.81□□□□□ -1.48
MRE11P49959 MIR4999-201ENST00000585029 91 ntBASIC5.81□□□□□ -1.48
MRE11P49959 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.81□□□□□ -1.48
MRE11P49959 AF131215.7-201ENST00000602443 707 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AL355073.2-201ENST00000612106 557 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AL139418.1-201ENST00000613613 177 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC018755.4-201ENST00000619715 454 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AL590240.3-201ENST00000621416 943 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC140113.4-201ENST00000622087 222 ntBASIC5.81□□□□□ -1.48
MRE11P49959 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC067931.1-201ENST00000624190 671 ntBASIC5.81□□□□□ -1.48
MRE11P49959 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.81□□□□□ -1.48
MRE11P49959 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.81□□□□□ -1.48
MRE11P49959 LINC01739-205ENST00000641890 573 ntBASIC5.81□□□□□ -1.48
MRE11P49959 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 AC005832.2-201ENST00000538921 1430 ntBASIC5.81□□□□□ -1.48
MRE11P49959 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
MRE11P49959 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 AC027514.1-201ENST00000588561 1603 ntBASIC5.81□□□□□ -1.48
MRE11P49959 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MRE11P49959 MTND5P24-201ENST00000438892 1767 ntBASIC5.8□□□□□ -1.48
MRE11P49959 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms