Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC231759.1-201ENST00000616455 597 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 LINC00901.1-201ENST00000617252 152 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-1P43699 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-1P43699 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-1P43699 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NKX2-1P43699 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 SNORA17.1-201ENST00000362945 126 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 RNU6-251P-201ENST00000363235 104 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 SUGT1P1-201ENST00000379514 476 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NKX2-1P43699 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX2-1P43699 RN7SKP206-201ENST00000410823 293 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 DDX39BP1-205ENST00000422507 192 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 CHEK2P5-201ENST00000423877 246 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC010099.3-201ENST00000423896 409 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.87□□□□□ -1.79
NKX2-1P43699 RPS17P8-201ENST00000434525 335 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 PRPF38AP2-201ENST00000438179 851 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 MTCYBP11-201ENST00000447254 1109 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC234781.3-201ENST00000452540 973 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC011979.1-201ENST00000472300 483 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 RN7SL101P-201ENST00000496350 279 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AC106872.4-201ENST00000510050 523 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 NBEAP1-201ENST00000554452 979 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AL049839.1-201ENST00000556151 657 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.87□□□□□ -1.79
NKX2-1P43699 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AC009712.1-201ENST00000564938 316 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 MTCYBP28-201ENST00000566728 1132 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC015912.2-201ENST00000571053 181 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC209154.1-201ENST00000582156 337 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AL390838.2-201ENST00000602394 274 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AL121932.1-201ENST00000605542 214 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC008966.2-201ENST00000606157 453 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-1P43699 AC009237.17-201ENST00000618111 748 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AL353662.3-201ENST00000625131 237 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX2-1P43699 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 OR14L1P-202ENST00000641545 3009 ntBASIC3.87□□□□□ -1.79
NKX2-1P43699 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-1P43699 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-1P43699 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC074029.4-201ENST00000624796 1859 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC011493.1-201ENST00000596753 1632 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RN7SKP162-201ENST00000363605 345 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RNY3P9-201ENST00000384727 106 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 SNORD65.1-201ENST00000390889 71 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 RNU6-1300P-201ENST00000391046 108 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 Z97832.1-201ENST00000402490 328 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 RN7SKP216-201ENST00000411050 312 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 RN7SKP126-201ENST00000411143 300 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms