Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-304P-201ENST00000364855 107 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TNFSF9P41273 AC069157.1-201ENST00000421749 137 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 NANOGP6-201ENST00000429190 847 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF9P41273 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF9P41273 SEPT14P1-201ENST00000458703 648 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF9P41273 RNA5SP164-201ENST00000516533 110 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 MTCYBP19-201ENST00000517463 1124 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF9P41273 AC008802.1-201ENST00000519121 791 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF9P41273 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF9P41273 AC233280.2-201ENST00000603917 1070 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 AC010200.2-201ENST00000605098 235 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 AP003392.5-201ENST00000607857 415 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 AC131238.1-201ENST00000617135 328 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF9P41273 AC119674.1-207ENST00000641355 633 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF9P41273 AC005332.5-201ENST00000591222 2919 ntBASIC4.06□□□□□ -1.76
TNFSF9P41273 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF9P41273 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF9P41273 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF9P41273 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF9P41273 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TNFSF9P41273 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TNFSF9P41273 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TNFSF9P41273 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF9P41273 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TNFSF9P41273 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TNFSF9P41273 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF9P41273 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TNFSF9P41273 RNA5SP51-201ENST00000364750 119 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 HLFP1-201ENST00000402375 499 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF9P41273 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF9P41273 AC004552.1-201ENST00000419089 348 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AL391219.1-201ENST00000422570 483 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF9P41273 RPL37P1-201ENST00000432310 284 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC092013.1-201ENST00000438795 332 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AL645931.1-201ENST00000439737 410 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 HMGB3P9-201ENST00000441799 583 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 SETD6P1-201ENST00000444575 317 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFSF9P41273 snoU13.22-201ENST00000459428 104 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 RPS26P3-201ENST00000470205 348 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF9P41273 AC090543.2-201ENST00000483963 348 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC004057.1-201ENST00000485827 348 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC069499.1-201ENST00000489433 509 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF9P41273 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF9P41273 AC067904.2-201ENST00000517322 1283 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.05□□□□□ -1.76
TNFSF9P41273 MYL12AP1-201ENST00000518490 515 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF9P41273 HMGB3P26-201ENST00000560051 582 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF9P41273 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF9P41273 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFSF9P41273 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF9P41273 PSMA6P4-201ENST00000603247 718 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC133552.5-201ENST00000604266 540 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC090953.1-201ENST00000604305 1092 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 HMGB1P51-201ENST00000605166 638 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF9P41273 AC020978.9-201ENST00000624380 1141 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TNFSF9P41273 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF9P41273 AC087190.4-201ENST00000574616 8334 ntBASIC4.05□□□□□ -1.76
TNFSF9P41273 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TNFSF9P41273 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF9P41273 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF9P41273 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF9P41273 RNU6-146P-201ENST00000384602 108 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 RPL21P17-201ENST00000397467 475 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF9P41273 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF9P41273 AL035423.1-201ENST00000420331 213 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.04□□□□□ -1.76
TNFSF9P41273 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.04□□□□□ -1.76
TNFSF9P41273 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF9P41273 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF9P41273 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF9P41273 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
TNFSF9P41273 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFSF9P41273 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.04□□□□□ -1.76
TNFSF9P41273 AC109458.1-201ENST00000508858 316 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF9P41273 RNU1-95P-201ENST00000516357 160 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 RNU1-128P-201ENST00000516704 160 ntBASIC4.04□□□□□ -1.76
TNFSF9P41273 SUMO2P20-201ENST00000520803 283 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms