Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.82□□□□□ -1.64
RFC4P35249 AC087190.4-201ENST00000574616 8334 ntBASIC4.82□□□□□ -1.64
RFC4P35249 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC4P35249 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC4P35249 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RFC4P35249 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RFC4P35249 MIR365B-201ENST00000362317 111 ntBASIC4.81□□□□□ -1.64
RFC4P35249 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC4P35249 AC234772.1-201ENST00000377927 937 ntBASIC4.81□□□□□ -1.64
RFC4P35249 RNU6-146P-201ENST00000384602 108 ntBASIC4.81□□□□□ -1.64
RFC4P35249 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC4P35249 ELOCP10-201ENST00000440624 327 ntBASIC4.81□□□□□ -1.64
RFC4P35249 ARL4AP3-201ENST00000441452 574 ntBASIC4.81□□□□□ -1.64
RFC4P35249 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC4P35249 AC005008.1-201ENST00000456151 612 ntBASIC4.81□□□□□ -1.64
RFC4P35249 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC4P35249 SNORD105B-201ENST00000458770 79 ntBASIC4.81□□□□□ -1.64
RFC4P35249 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC4P35249 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC4P35249 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC4P35249 AC022882.1-201ENST00000532142 501 ntBASIC4.81□□□□□ -1.64
RFC4P35249 AC100770.1-201ENST00000532310 322 ntBASIC4.81□□□□□ -1.64
RFC4P35249 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFC4P35249 AC007458.1-201ENST00000542812 373 ntBASIC4.81□□□□□ -1.64
RFC4P35249 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC4P35249 AC087888.1-201ENST00000550884 1254 ntBASIC4.81□□□□□ -1.64
RFC4P35249 AC007599.1-201ENST00000568688 1174 ntBASIC4.81□□□□□ -1.64
RFC4P35249 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.81□□□□□ -1.64
RFC4P35249 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC4P35249 ELOCP34-201ENST00000604436 327 ntBASIC4.81□□□□□ -1.64
RFC4P35249 AL354760.1-201ENST00000608357 643 ntBASIC4.81□□□□□ -1.64
RFC4P35249 AC023509.5-201ENST00000617434 807 ntBASIC4.81□□□□□ -1.64
RFC4P35249 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.81□□□□□ -1.64
RFC4P35249 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.81□□□□□ -1.64
RFC4P35249 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RFC4P35249 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
RFC4P35249 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RFC4P35249 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFC4P35249 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC4P35249 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 SYT14P1-202ENST00000600441 1448 ntBASIC4.8□□□□□ -1.64
RFC4P35249 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
RFC4P35249 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RFC4P35249 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 RNU6-225P-201ENST00000384613 103 ntBASIC4.8□□□□□ -1.64
RFC4P35249 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC4P35249 OR4K6P-201ENST00000416478 897 ntBASIC4.8□□□□□ -1.64
RFC4P35249 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC4P35249 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC4P35249 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 AC092641.1-201ENST00000440229 772 ntBASIC4.8□□□□□ -1.64
RFC4P35249 AC073387.1-201ENST00000453261 709 ntBASIC4.8□□□□□ -1.64
RFC4P35249 RPS29P2-201ENST00000479278 136 ntBASIC4.8□□□□□ -1.64
RFC4P35249 SNORA70.17-201ENST00000516449 133 ntBASIC4.8□□□□□ -1.64
RFC4P35249 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.8□□□□□ -1.64
RFC4P35249 IGLV3-26-201ENST00000520756 302 ntBASIC4.8□□□□□ -1.64
RFC4P35249 AC090819.1-201ENST00000523800 1111 ntBASIC4.8□□□□□ -1.64
RFC4P35249 GTF2IP8-201ENST00000560687 584 ntBASIC4.8□□□□□ -1.64
RFC4P35249 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.8□□□□□ -1.64
RFC4P35249 AC020914.6-201ENST00000594327 272 ntBASIC4.8□□□□□ -1.64
RFC4P35249 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC4P35249 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC4P35249 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC4P35249 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.8□□□□□ -1.64
RFC4P35249 LINC00901.1-201ENST00000617252 152 ntBASIC4.8□□□□□ -1.64
RFC4P35249 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.8□□□□□ -1.64
RFC4P35249 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC4P35249 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 AL049781.1-201ENST00000623195 3585 ntBASIC4.79□□□□□ -1.64
RFC4P35249 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFC4P35249 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 AL034374.1-201ENST00000406329 351 ntBASIC4.79□□□□□ -1.64
RFC4P35249 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 MTCYBP7-201ENST00000419540 1134 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC4P35249 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC4P35249 CACYBPP1-201ENST00000438592 684 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 GEMIN8P3-201ENST00000445417 720 ntBASIC4.79□□□□□ -1.64
RFC4P35249 RPL5P30-201ENST00000465511 891 ntBASIC4.79□□□□□ -1.64
RFC4P35249 RN7SL601P-201ENST00000471221 293 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AC006517.1-201ENST00000480485 328 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AC021146.3-201ENST00000511911 260 ntBASIC4.79□□□□□ -1.64
RFC4P35249 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.79□□□□□ -1.64
RFC4P35249 SNORD116-30-201ENST00000516468 85 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AC069240.1-201ENST00000548774 375 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AC011270.1-201ENST00000558606 583 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC4P35249 AC068714.1-201ENST00000559623 800 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AC106782.4-201ENST00000568264 210 ntBASIC4.79□□□□□ -1.64
RFC4P35249 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.79□□□□□ -1.64
RFC4P35249 AC010615.3-201ENST00000597319 394 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms