Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC104837.2-201ENST00000427236 424 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 RPS4XP4-201ENST00000443195 763 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.21□□□□□ -1.74
CASQ1P31415 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.21□□□□□ -1.74
CASQ1P31415 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.21□□□□□ -1.74
CASQ1P31415 RPL29P29-201ENST00000448725 423 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.21□□□□□ -1.74
CASQ1P31415 C1DP3-201ENST00000455013 423 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.21□□□□□ -1.74
CASQ1P31415 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 RNA5SP246-201ENST00000458909 119 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 RPS20P4-201ENST00000461659 355 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 RN7SL354P-201ENST00000469282 294 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.21□□□□□ -1.74
CASQ1P31415 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 IGBP1P5-201ENST00000507524 1000 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.21□□□□□ -1.74
CASQ1P31415 AC108120.2-201ENST00000512973 294 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.21□□□□□ -1.74
CASQ1P31415 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.21□□□□□ -1.74
CASQ1P31415 AC090877.1-201ENST00000561418 344 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.21□□□□□ -1.74
CASQ1P31415 MIR4646-201ENST00000580775 63 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AP000919.1-202ENST00000581139 1264 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AC234771.5-201ENST00000600161 514 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 ATE1-AS1-202ENST00000636460 506 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 MIR4302-201ENST00000638058 60 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CASQ1P31415 OR6C71P-202ENST00000641886 1107 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CASQ1P31415 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CASQ1P31415 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CASQ1P31415 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.2□□□□□ -1.74
CASQ1P31415 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CASQ1P31415 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CASQ1P31415 SNORA60-201ENST00000362396 134 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.2□□□□□ -1.74
CASQ1P31415 MIR591-201ENST00000385290 95 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASQ1P31415 GSTA12P-201ENST00000402398 508 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 HMGB3P19-201ENST00000403971 560 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 AL391417.1-201ENST00000404100 426 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 RPL26P37-201ENST00000411983 438 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 RPL31P2-201ENST00000413849 377 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 AC002075.2-201ENST00000425207 252 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.2□□□□□ -1.74
CASQ1P31415 RPS27AP12-201ENST00000429552 465 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 MTCO1P43-201ENST00000431831 488 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 MED6P1-201ENST00000439659 713 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 FCF1P7-201ENST00000451185 558 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.2□□□□□ -1.74
CASQ1P31415 RPL31P13-201ENST00000484151 370 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CASQ1P31415 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.2□□□□□ -1.74
CASQ1P31415 AC093755.1-201ENST00000512950 1023 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 RNU6-1004P-201ENST00000516584 111 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.2□□□□□ -1.74
CASQ1P31415 IGLV2-28-201ENST00000520681 304 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.2□□□□□ -1.74
CASQ1P31415 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.2□□□□□ -1.74
CASQ1P31415 OR8L1P-201ENST00000534005 955 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.2□□□□□ -1.74
CASQ1P31415 TVP23BP1-201ENST00000557500 617 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 AL392112.1-201ENST00000605115 829 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.2□□□□□ -1.74
CASQ1P31415 PLCE1P1-201ENST00000622094 305 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 AC002044.3-201ENST00000623314 541 ntBASIC4.2□□□□□ -1.74
CASQ1P31415 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.2□□□□□ -1.74
CASQ1P31415 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASQ1P31415 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CASQ1P31415 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CASQ1P31415 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
CASQ1P31415 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CASQ1P31415 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CASQ1P31415 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASQ1P31415 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASQ1P31415 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CASQ1P31415 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASQ1P31415 RAD1P1-201ENST00000231383 813 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASQ1P31415 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CASQ1P31415 MIR607-201ENST00000385241 96 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.19□□□□□ -1.74
CASQ1P31415 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.19□□□□□ -1.74
CASQ1P31415 HIGD1AP4-201ENST00000430194 280 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AC068287.1-201ENST00000430283 295 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 NDUFA5P10-201ENST00000432147 357 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AC006994.1-201ENST00000438212 839 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 AC073648.4-201ENST00000442655 781 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 HMGB1P26-201ENST00000452520 628 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 RPS20P21-201ENST00000466859 343 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.19□□□□□ -1.74
CASQ1P31415 RN7SL810P-201ENST00000493031 276 ntBASIC4.19□□□□□ -1.74
CASQ1P31415 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CASQ1P31415 AC008958.1-201ENST00000511047 682 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms