Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CASC19-280ENST00000642102 1351 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC12P31275 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 RNU1-134P-201ENST00000362935 165 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RNA5SP391-201ENST00000363456 119 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RNA5SP242-201ENST00000364171 118 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 Y_RNA.295-201ENST00000364918 102 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HOXC12P31275 RNU6-178P-201ENST00000384631 104 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RPS3AP9-201ENST00000417027 792 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 USP9YP27-201ENST00000418455 438 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 MTCO1P20-201ENST00000425366 358 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RPS7P14-201ENST00000426405 583 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC092013.1-201ENST00000438795 332 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC12P31275 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC12P31275 UBE2V1P7-201ENST00000446395 340 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC12P31275 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC104563.1-201ENST00000476147 376 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RN7SL717P-201ENST00000478343 297 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 COX6B1P2-201ENST00000489624 230 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 AP001025.2-201ENST00000490908 477 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RPL17P2-201ENST00000491913 451 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RPL15P21-201ENST00000495592 567 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RNU6-507P-201ENST00000516045 100 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 RNA5SP340-201ENST00000517132 107 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HOXC12P31275 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC090424.1-201ENST00000535243 736 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 AC011840.5-201ENST00000582125 771 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 MIR3176-201ENST00000582210 90 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC12P31275 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 AC008536.2-201ENST00000607284 349 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 AC091905.1-201ENST00000624400 311 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HOXC12P31275 MAPK10-338ENST00000641647 3362 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 AC005332.5-201ENST00000591222 2919 ntBASIC5.41□□□□□ -1.54
HOXC12P31275 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HOXC12P31275 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC12P31275 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC12P31275 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC12P31275 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC12P31275 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HOXC12P31275 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXC12P31275 RNA5SP477-201ENST00000362639 119 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 RNU6-744P-201ENST00000365557 107 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXC12P31275 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HOXC12P31275 RNU6-1316P-201ENST00000384242 108 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 SNORA68.2-201ENST00000391263 128 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC12P31275 AL096800.1-201ENST00000405326 893 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 NPM1P40-201ENST00000412758 733 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 RPL35AP31-201ENST00000418340 337 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 AC007568.1-201ENST00000422912 471 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC12P31275 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC12P31275 AC234779.1-201ENST00000425910 285 ntBASIC5.4□□□□□ -1.54
HOXC12P31275 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms