Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.56□□□□□ -1.84
CD40LGP29965 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40LGP29965 PTGES3P3-201ENST00000511479 482 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 MTND1P6-201ENST00000523621 946 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 OR5D17P-201ENST00000531492 978 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.56□□□□□ -1.84
CD40LGP29965 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.56□□□□□ -1.84
CD40LGP29965 MIR3186-201ENST00000577404 85 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.56□□□□□ -1.84
CD40LGP29965 AC115989.2-201ENST00000578640 563 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 MIR5047-201ENST00000579212 100 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 RN7SL690P-201ENST00000582087 240 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 AC069304.3-201ENST00000603938 1084 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 AC090525.3-201ENST00000605601 189 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 AC022079.2-201ENST00000619739 566 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 AC091905.1-201ENST00000624400 311 ntBASIC3.56□□□□□ -1.84
CD40LGP29965 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CD40LGP29965 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40LGP29965 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40LGP29965 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.56□□□□□ -1.84
CD40LGP29965 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40LGP29965 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CD40LGP29965 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40LGP29965 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40LGP29965 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CD40LGP29965 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.56□□□□□ -1.84
CD40LGP29965 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CD40LGP29965 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.55□□□□□ -1.84
CD40LGP29965 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 MIR1251-201ENST00000408552 70 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 AL139095.3-201ENST00000419672 1203 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 RPL31P12-201ENST00000422587 358 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 CNOT7P1-201ENST00000429006 852 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 NDUFA5P10-201ENST00000432147 357 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 MED6P1-201ENST00000439659 713 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 SERPINA7P1-201ENST00000443077 631 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 HMGB1P26-201ENST00000452520 628 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 NDUFA12P1-201ENST00000455914 406 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC010468.1-201ENST00000461022 817 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC053481.1-201ENST00000467217 306 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 RPL12P20-201ENST00000475538 479 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 RPS29P19-201ENST00000479709 171 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.55□□□□□ -1.84
CD40LGP29965 RPL7P24-201ENST00000493052 752 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.55□□□□□ -1.84
CD40LGP29965 RNU4-60P-201ENST00000517239 135 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC067904.2-201ENST00000517322 1283 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 IGKV2-23-201ENST00000518729 323 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.55□□□□□ -1.84
CD40LGP29965 AP001781.1-201ENST00000530977 207 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.55□□□□□ -1.84
CD40LGP29965 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40LGP29965 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 AC245389.2-201ENST00000616023 576 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC243756.2-201ENST00000618406 463 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC242843.1-201ENST00000618702 573 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC048347.1-201ENST00000624621 427 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.55□□□□□ -1.84
CD40LGP29965 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
CD40LGP29965 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CD40LGP29965 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.55□□□□□ -1.84
CD40LGP29965 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40LGP29965 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CD40LGP29965 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40LGP29965 AC079741.1-201ENST00000321498 212 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 RNA5SP189-201ENST00000364920 115 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 SNORA70F-201ENST00000384142 135 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 PTMAP5-201ENST00000393073 333 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 MIR937-201ENST00000401271 86 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 GSTA12P-201ENST00000402398 508 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 AL049697.2-201ENST00000403708 294 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 HMGB1P13-201ENST00000406019 642 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40LGP29965 LIPT1P1-201ENST00000415870 1186 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 P2RY10P2-201ENST00000416730 913 ntBASIC3.54□□□□□ -1.84
CD40LGP29965 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CD40LGP29965 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40LGP29965 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40LGP29965 USP9YP31-201ENST00000431405 881 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms