Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNU2-72P-201ENST00000411175 163 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 RNA5SP39-201ENST00000411245 120 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN6P29350 VN1R42P-201ENST00000424651 344 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 AC011998.1-201ENST00000433403 117 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 GSTA7P-201ENST00000438425 448 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 RPL23AP89-201ENST00000439324 255 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN6P29350 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN6P29350 RN7SL810P-201ENST00000493031 276 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 AC005351.1-201ENST00000511152 786 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 AC093840.1-201ENST00000511599 336 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN6P29350 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN6P29350 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN6P29350 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN6P29350 AL121890.3-201ENST00000618494 516 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 AC016717.3-201ENST00000624730 554 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PTPN6P29350 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN6P29350 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN6P29350 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PTPN6P29350 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN6P29350 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN6P29350 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
PTPN6P29350 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 SNORA70.2-201ENST00000364506 135 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 SNORA11F-201ENST00000408237 128 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN6P29350 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN6P29350 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 AL161631.1-201ENST00000417933 486 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 AC092832.1-201ENST00000422934 400 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 FTH1P6-201ENST00000430768 320 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC073143.1-201ENST00000436316 395 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 CBX1P1-201ENST00000440184 427 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 YWHAQP9-201ENST00000445891 512 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN6P29350 SNRPGP5-201ENST00000456003 220 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 RN7SL98P-201ENST00000462271 300 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC068587.1-201ENST00000483613 781 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN6P29350 AC026979.1-201ENST00000492525 396 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AL035404.1-201ENST00000497982 568 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC017037.1-201ENST00000508460 471 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC027338.1-201ENST00000514840 825 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC010476.1-201ENST00000519111 851 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN6P29350 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN6P29350 UBTFL9-201ENST00000534504 1148 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 PARP1P2-201ENST00000556806 195 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC007599.1-201ENST00000568688 1174 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPN6P29350 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN6P29350 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPN6P29350 RNA5SP108-201ENST00000605921 117 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AC006338.2-201ENST00000616864 791 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN6P29350 C2orf27A-204ENST00000623058 969 ntBASIC4.03□□□□□ -1.76
PTPN6P29350 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN6P29350 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN6P29350 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PTPN6P29350 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN6P29350 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN6P29350 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PTPN6P29350 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN6P29350 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PTPN6P29350 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PTPN6P29350 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN6P29350 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.77
PTPN6P29350 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
PTPN6P29350 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PTPN6P29350 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN6P29350 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN6P29350 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN6P29350 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PTPN6P29350 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN6P29350 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPN6P29350 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PTPN6P29350 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPN6P29350 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN6P29350 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN6P29350 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPN6P29350 OR4K17-201ENST00000315543 1032 ntBASIC4.02□□□□□ -1.77
PTPN6P29350 MIR16-2-201ENST00000362117 81 ntBASIC4.02□□□□□ -1.77
PTPN6P29350 MIR331-201ENST00000362302 94 ntBASIC4.02□□□□□ -1.77
PTPN6P29350 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
PTPN6P29350 SNORA37-201ENST00000384504 129 ntBASIC4.02□□□□□ -1.77
PTPN6P29350 AL356967.1-201ENST00000406305 431 ntBASIC4.02□□□□□ -1.77
PTPN6P29350 RNA5SP306-201ENST00000411087 107 ntBASIC4.02□□□□□ -1.77
PTPN6P29350 HMGB3P31-201ENST00000413333 595 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms