Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SMARCA1P28370 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 SNORA70F-201ENST00000384142 135 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 MIR16-1-201ENST00000385271 89 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AL445487.1-201ENST00000415694 1580 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 ATG4AP1-201ENST00000416893 538 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 AL365203.2-201ENST00000423444 196 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 GTF2IP23-201ENST00000423746 351 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 AC009965.2-201ENST00000425328 970 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AL593851.1-201ENST00000426171 157 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.44□□□□□ -1.54
SMARCA1P28370 RPS26P47-201ENST00000427219 348 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 RPL34P6-201ENST00000432390 345 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 GSTA7P-201ENST00000438425 448 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.44□□□□□ -1.54
SMARCA1P28370 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 RNU7-125P-201ENST00000458760 62 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 RNU2-30P-201ENST00000516209 141 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.44□□□□□ -1.54
SMARCA1P28370 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.44□□□□□ -1.54
SMARCA1P28370 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AL031281.1-201ENST00000604049 488 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.44□□□□□ -1.54
SMARCA1P28370 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 AL139418.1-201ENST00000613613 177 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 AC016717.3-201ENST00000624730 554 ntBASIC5.44□□□□□ -1.54
SMARCA1P28370 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
SMARCA1P28370 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMARCA1P28370 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.44□□□□□ -1.54
SMARCA1P28370 AP000776.1-201ENST00000530032 1663 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 KARSP3-201ENST00000571212 1504 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.43□□□□□ -1.54
SMARCA1P28370 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMARCA1P28370 SGO1P2-201ENST00000429458 1589 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AL049737.1-201ENST00000413920 1403 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA1P28370 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 AC015813.6-201ENST00000624409 5808 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 Y_RNA.318-201ENST00000365131 97 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 SNORD65.1-201ENST00000390889 71 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 RNA5SP397-201ENST00000391323 118 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 AL049697.2-201ENST00000403708 294 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA1P28370 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 RPL7P44-201ENST00000424827 742 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.43□□□□□ -1.54
SMARCA1P28370 DYNLL1P7-201ENST00000429273 258 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA1P28370 ATP5F1P1-201ENST00000433775 569 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 UBE2V1P5-201ENST00000440070 405 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AL138878.2-201ENST00000440581 1241 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA1P28370 HMGB3P9-201ENST00000441799 583 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.43□□□□□ -1.54
SMARCA1P28370 RPL23AP71-201ENST00000470966 469 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 RPS3AP43-201ENST00000479743 781 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.43□□□□□ -1.54
SMARCA1P28370 RPL36AP41-201ENST00000493820 306 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 DYNLL1P6-201ENST00000503440 264 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.43□□□□□ -1.54
SMARCA1P28370 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.43□□□□□ -1.54
SMARCA1P28370 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMARCA1P28370 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.43□□□□□ -1.54
SMARCA1P28370 AP000619.3-201ENST00000535634 1127 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.43□□□□□ -1.54
SMARCA1P28370 AC090751.1-201ENST00000566966 267 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 AC073091.2-201ENST00000603205 907 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms