Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AL358472.1-201ENST00000431295 329 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC073648.4-201ENST00000442655 781 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 MRPS31P2-201ENST00000451581 518 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 HMGB1P26-201ENST00000452520 628 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 RN7SL330P-201ENST00000469709 307 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 PTGES3P3-201ENST00000511479 482 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 RNA5SP49-201ENST00000516450 115 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 RNU6-1308P-201ENST00000516817 103 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 RN7SKP209-201ENST00000516888 304 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AP000676.2-201ENST00000529711 301 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC105233.3-201ENST00000531125 744 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC115085.1-201ENST00000588924 229 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 FAM27D1-201ENST00000612308 341 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC090510.2-201ENST00000617465 629 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC068870.2-201ENST00000620635 389 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DMAP28067 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DMAP28067 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DMAP28067 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AL592148.3-201ENST00000608771 2646 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AL645927.1-201ENST00000396783 406 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 GSTA12P-201ENST00000402398 508 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC004987.3-201ENST00000413879 771 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 RPL12P3-201ENST00000440080 396 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 RN7SL98P-201ENST00000462271 300 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 RPL23AP44-201ENST00000482216 473 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 NDUFB5P1-201ENST00000508134 564 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC110792.2-201ENST00000510278 224 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 SOD1P3-201ENST00000518682 454 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AP001922.4-201ENST00000526967 290 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 OR5D17P-201ENST00000531492 978 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 CENPUP2-201ENST00000555897 1186 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 MTND4LP24-201ENST00000572277 291 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC025627.2-201ENST00000576220 160 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC245389.2-201ENST00000616023 576 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC121761.2-201ENST00000617300 689 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 MIR6729-201ENST00000618194 65 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC243756.2-201ENST00000618406 463 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC242843.1-201ENST00000618702 573 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC124312.6-202ENST00000623624 418 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
HLA-DMAP28067 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HLA-DMAP28067 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms