Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN3P26045 RPL37P1-201ENST00000432310 284 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 HMGB1P48-201ENST00000446155 598 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 PHBP16-201ENST00000446318 950 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 OR51B8P-201ENST00000449892 769 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 NDUFA12P1-201ENST00000455914 406 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN3P26045 RN7SL98P-201ENST00000462271 300 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 AC104164.2-201ENST00000496953 495 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 AC005351.1-201ENST00000511152 786 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 RN7SKP96-201ENST00000516948 297 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN3P26045 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.4□□□□□ -1.71
PTPN3P26045 AL109766.1-201ENST00000555080 552 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 AP000919.1-202ENST00000581139 1264 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.4□□□□□ -1.71
PTPN3P26045 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 BNIP3P40-201ENST00000596017 556 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 VN1R87P-201ENST00000596706 487 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.4□□□□□ -1.71
PTPN3P26045 AC093673.2-201ENST00000609674 331 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PTPN3P26045 AC025125.1-201ENST00000624743 1922 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 XPOTP1-201ENST00000443317 2398 ntBASIC4.4□□□□□ -1.71
PTPN3P26045 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN3P26045 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 AC073055.1-201ENST00000456901 1621 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTPN3P26045 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN3P26045 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN3P26045 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 RNU5B-1-201ENST00000363286 116 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 RNA5SP391-201ENST00000363456 119 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 RNU5E-10P-201ENST00000363506 118 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 RNA5SP28-201ENST00000363841 119 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 RNU6-236P-201ENST00000363886 106 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 RPS23P10-201ENST00000416185 486 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC114814.2-201ENST00000419195 485 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN3P26045 RPS27AP7-201ENST00000422792 455 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPN3P26045 CNOT7P1-201ENST00000429006 852 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC011998.1-201ENST00000433403 117 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AL132765.1-201ENST00000434165 553 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN3P26045 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN3P26045 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN3P26045 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN3P26045 RN7SL738P-201ENST00000470264 297 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC108145.1-201ENST00000503770 153 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN3P26045 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 NDUFB4P12-201ENST00000513465 390 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC006064.5-201ENST00000541782 248 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC124068.1-201ENST00000563131 678 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 MIR4330-201ENST00000579077 105 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC233280.2-201ENST00000603917 1070 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC022079.2-201ENST00000619739 566 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC140479.6-201ENST00000633535 357 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN3P26045 AC099654.8-201ENST00000637757 681 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 AC013437.2-201ENST00000639587 677 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN3P26045 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
PTPN3P26045 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN3P26045 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PTPN3P26045 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PTPN3P26045 MTCO1P6-201ENST00000481192 1384 ntBASIC4.39□□□□□ -1.71
PTPN3P26045 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN3P26045 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN3P26045 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN3P26045 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms