Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 AC017007.4-201ENST00000503353 1352 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 AC006504.1-201ENST00000562493 3666 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL8A2P25067 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
COL8A2P25067 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.2□□□□□ -1.9
COL8A2P25067 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.2□□□□□ -1.9
COL8A2P25067 AL035423.1-201ENST00000420331 213 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 RFESDP1-201ENST00000422350 461 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 RWDD4P2-201ENST00000426392 563 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.2□□□□□ -1.9
COL8A2P25067 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.2□□□□□ -1.9
COL8A2P25067 AL133477.1-201ENST00000457472 514 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 RNU6-775P-201ENST00000459318 96 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.2□□□□□ -1.9
COL8A2P25067 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.2□□□□□ -1.9
COL8A2P25067 RPL23AP71-201ENST00000470966 469 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 RWDD4P1-201ENST00000488019 565 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 AC106872.2-201ENST00000494303 480 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.2□□□□□ -1.9
COL8A2P25067 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.2□□□□□ -1.9
COL8A2P25067 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.2□□□□□ -1.9
COL8A2P25067 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.2□□□□□ -1.9
COL8A2P25067 RNA5SP164-201ENST00000516533 110 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.2□□□□□ -1.9
COL8A2P25067 SULT1C2P2-201ENST00000562517 294 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.2□□□□□ -1.9
COL8A2P25067 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.2□□□□□ -1.9
COL8A2P25067 AC079791.1-201ENST00000605356 973 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 HMGB1P50-201ENST00000605814 607 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 AL354760.1-201ENST00000608357 643 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.2□□□□□ -1.9
COL8A2P25067 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
COL8A2P25067 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL8A2P25067 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
COL8A2P25067 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL8A2P25067 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL8A2P25067 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL8A2P25067 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
COL8A2P25067 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL8A2P25067 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.2□□□□□ -1.9
COL8A2P25067 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL8A2P25067 AC240504.1-201ENST00000395709 845 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 RPL21P17-201ENST00000397467 475 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 RPL7P60-201ENST00000397636 735 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.19□□□□□ -1.9
COL8A2P25067 CYP4F29P-201ENST00000420685 446 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.19□□□□□ -1.9
COL8A2P25067 UBE2V2P3-201ENST00000433562 437 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 SNORA71B-202ENST00000439232 272 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.19□□□□□ -1.9
COL8A2P25067 AL358232.1-201ENST00000448030 501 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AL157884.3-201ENST00000448273 1184 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.19□□□□□ -1.9
COL8A2P25067 RPL7P15-201ENST00000461190 712 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 UBE2CP3-201ENST00000502715 450 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.19□□□□□ -1.9
COL8A2P25067 HMGN1P11-201ENST00000508668 303 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.19□□□□□ -1.9
COL8A2P25067 AC007991.1-201ENST00000522680 631 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AC025857.1-201ENST00000525252 377 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AC135001.1-201ENST00000544546 283 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.19□□□□□ -1.9
COL8A2P25067 AC068446.3-201ENST00000555285 382 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.19□□□□□ -1.9
COL8A2P25067 MIR5187-201ENST00000583479 76 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.19□□□□□ -1.9
COL8A2P25067 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.19□□□□□ -1.9
COL8A2P25067 AL049634.3-201ENST00000604968 457 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 SNORA51-201ENST00000606420 132 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AL356274.1-201ENST00000617064 410 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 MIR6075-201ENST00000620782 95 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 AL359715.5-201ENST00000623431 443 ntBASIC3.19□□□□□ -1.9
COL8A2P25067 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.19□□□□□ -1.9
COL8A2P25067 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.19□□□□□ -1.9
COL8A2P25067 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL8A2P25067 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.19□□□□□ -1.9
COL8A2P25067 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL8A2P25067 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.19□□□□□ -1.9
COL8A2P25067 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL8A2P25067 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
COL8A2P25067 FAM35DP-201ENST00000323387 2712 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC007342.9-201ENST00000623877 1385 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms