Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FO082796.1-201ENST00000523795 183 ntBASIC6.78□□□□□ -1.32
RFX1P22670 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RFX1P22670 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RFX1P22670 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.78□□□□□ -1.32
RFX1P22670 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.78□□□□□ -1.32
RFX1P22670 AC007038.2-201ENST00000608095 740 ntBASIC6.78□□□□□ -1.32
RFX1P22670 AP001437.1-201ENST00000608783 456 ntBASIC6.78□□□□□ -1.32
RFX1P22670 AC009233.1-201ENST00000616477 371 ntBASIC6.78□□□□□ -1.32
RFX1P22670 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 SNORA17.5-201ENST00000630429 132 ntBASIC6.78□□□□□ -1.32
RFX1P22670 AC073488.6-201ENST00000632293 754 ntBASIC6.78□□□□□ -1.32
RFX1P22670 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.78□□□□□ -1.32
RFX1P22670 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 NMD3P1-201ENST00000439704 1488 ntBASIC6.78□□□□□ -1.32
RFX1P22670 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.78□□□□□ -1.32
RFX1P22670 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.77□□□□□ -1.33
RFX1P22670 RNU6-1097P-201ENST00000363586 107 ntBASIC6.77□□□□□ -1.33
RFX1P22670 RNU6-108P-201ENST00000365558 107 ntBASIC6.77□□□□□ -1.33
RFX1P22670 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 SSXP10-201ENST00000402595 565 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.77□□□□□ -1.33
RFX1P22670 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.77□□□□□ -1.33
RFX1P22670 AL035410.1-201ENST00000427409 427 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.77□□□□□ -1.33
RFX1P22670 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 RPL10P17-201ENST00000453852 316 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 RANP2-201ENST00000456833 229 ntBASIC6.77□□□□□ -1.33
RFX1P22670 RNU6-261P-201ENST00000459506 102 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AC098847.1-201ENST00000473094 348 ntBASIC6.77□□□□□ -1.33
RFX1P22670 UBFD1P1-201ENST00000473259 814 ntBASIC6.77□□□□□ -1.33
RFX1P22670 RPL39P36-201ENST00000490784 156 ntBASIC6.77□□□□□ -1.33
RFX1P22670 RN7SL101P-201ENST00000496350 279 ntBASIC6.77□□□□□ -1.33
RFX1P22670 NIFKP7-201ENST00000503365 834 ntBASIC6.77□□□□□ -1.33
RFX1P22670 NDUFA5P12-201ENST00000503796 343 ntBASIC6.77□□□□□ -1.33
RFX1P22670 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 RNA5SP418-201ENST00000515951 117 ntBASIC6.77□□□□□ -1.33
RFX1P22670 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 OR8L1P-201ENST00000534005 955 ntBASIC6.77□□□□□ -1.33
RFX1P22670 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 SETP2-201ENST00000553886 926 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AL356432.3-201ENST00000568952 465 ntBASIC6.77□□□□□ -1.33
RFX1P22670 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 AC005332.4-201ENST00000592752 579 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 RPL26P30-202ENST00000602923 645 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AL352984.2-201ENST00000611153 546 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.77□□□□□ -1.33
RFX1P22670 AL596245.1-201ENST00000618994 362 ntBASIC6.77□□□□□ -1.33
RFX1P22670 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.77□□□□□ -1.33
RFX1P22670 AC009318.4-201ENST00000620496 486 ntBASIC6.77□□□□□ -1.33
RFX1P22670 YWHAEP7-203ENST00000622054 312 ntBASIC6.77□□□□□ -1.33
RFX1P22670 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 AC099654.6-201ENST00000636487 512 ntBASIC6.77□□□□□ -1.33
RFX1P22670 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RFX1P22670 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RFX1P22670 ELL2P4-201ENST00000446870 1376 ntBASIC6.77□□□□□ -1.33
RFX1P22670 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.77□□□□□ -1.33
RFX1P22670 ZNF680P1-201ENST00000436625 1469 ntBASIC6.77□□□□□ -1.33
RFX1P22670 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RFX1P22670 LINC00622-201ENST00000562811 1570 ntBASIC6.77□□□□□ -1.33
RFX1P22670 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.77□□□□□ -1.33
RFX1P22670 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RFX1P22670 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RFX1P22670 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RFX1P22670 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 AL122126.1-201ENST00000546905 1318 ntBASIC6.76□□□□□ -1.33
RFX1P22670 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 Y_RNA.86-201ENST00000363020 111 ntBASIC6.76□□□□□ -1.33
RFX1P22670 Y_RNA.356-201ENST00000365475 113 ntBASIC6.76□□□□□ -1.33
RFX1P22670 SNORA20.2-201ENST00000383922 131 ntBASIC6.76□□□□□ -1.33
RFX1P22670 SNORA70.9-201ENST00000384370 135 ntBASIC6.76□□□□□ -1.33
RFX1P22670 RNA5SP198-201ENST00000410376 127 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 SNRPFP1-201ENST00000414761 252 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms