Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 Y_RNA.381-201ENST00000365666 102 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 MIR606-201ENST00000384851 96 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 MIR1305-201ENST00000408300 86 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD8P13378 AL355433.1-201ENST00000422804 300 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 RPL35AP12-201ENST00000425362 338 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 AL445669.1-201ENST00000426743 755 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD8P13378 RPEP2-201ENST00000432149 701 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 CBWD4P-201ENST00000445695 655 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 MTCO1P27-201ENST00000448269 226 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXD8P13378 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 AP006245.2-201ENST00000522004 300 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD8P13378 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 AC006504.6-201ENST00000590142 199 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HOXD8P13378 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 AC093311.1-201ENST00000506586 2021 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 MTND5P23-201ENST00000430812 1655 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD8P13378 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD8P13378 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 CKAP2P1-201ENST00000555477 2049 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 AC108467.2-201ENST00000617640 1597 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD8P13378 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXD8P13378 AC025574.1-201ENST00000554784 1653 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HOXD8P13378 RNA5SP183-201ENST00000362452 119 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD8P13378 Z97832.1-201ENST00000402490 328 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXD8P13378 RPL12P9-201ENST00000412942 488 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 RPS6P23-201ENST00000413224 722 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 MRPL50P2-201ENST00000416821 482 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 AL592293.2-201ENST00000422292 996 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 RPL7P57-201ENST00000423238 740 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.4□□□□□ -1.38
HOXD8P13378 ATP5JP1-201ENST00000431631 322 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 CFL1P1-202ENST00000432948 411 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HOXD8P13378 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD8P13378 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXD8P13378 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 RN7SL583P-201ENST00000475692 287 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 RN7SL727P-201ENST00000482164 296 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD8P13378 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXD8P13378 BX510359.5-201ENST00000515651 304 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD8P13378 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HOXD8P13378 AL352979.3-201ENST00000553515 247 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXD8P13378 AL390726.5-202ENST00000564800 256 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD8P13378 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD8P13378 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD8P13378 AC006115.2-201ENST00000596823 202 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 AP001521.1-201ENST00000609150 300 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 SDR42E1P1-201ENST00000611327 477 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 AC093913.1-201ENST00000614178 329 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXD8P13378 TPTEP1-208ENST00000636884 213 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HOXD8P13378 AC007996.1-201ENST00000620414 2821 ntBASIC6.4□□□□□ -1.38
HOXD8P13378 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD8P13378 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
HOXD8P13378 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD8P13378 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD8P13378 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
HOXD8P13378 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.4□□□□□ -1.39
HOXD8P13378 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD8P13378 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.4□□□□□ -1.39
HOXD8P13378 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
HOXD8P13378 LINC00622-201ENST00000562811 1570 ntBASIC6.4□□□□□ -1.39
HOXD8P13378 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
HOXD8P13378 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
HOXD8P13378 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms