Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 HMGB3P22-202ENST00000451823 572 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A1P12107 RPL6P9-201ENST00000466502 859 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 AL049873.1-201ENST00000480540 376 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A1P12107 OR5AP1P-201ENST00000529730 940 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 AC005476.1-201ENST00000554427 397 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A1P12107 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.03□□□□□ -1.76
COL11A1P12107 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.03□□□□□ -1.76
COL11A1P12107 AC009237.17-201ENST00000618111 748 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
COL11A1P12107 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A1P12107 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A1P12107 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A1P12107 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A1P12107 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A1P12107 MIR93-201ENST00000385024 80 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 NPM1P48-201ENST00000436002 853 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A1P12107 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A1P12107 RN7SL809P-201ENST00000482040 297 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 AC092747.2-201ENST00000545069 983 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A1P12107 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A1P12107 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A1P12107 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A1P12107 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A1P12107 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
COL11A1P12107 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A1P12107 RPL23AP82-202ENST00000427528 469 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 USP12PY-201ENST00000427677 1064 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 FTH1P25-201ENST00000447665 469 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 CENPBD1P1-201ENST00000464061 469 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 AC084357.1-201ENST00000473404 255 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 AC006445.1-201ENST00000491925 405 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 AGGF1P3-201ENST00000493675 1213 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
COL11A1P12107 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A1P12107 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.02□□□□□ -1.77
COL11A1P12107 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.02□□□□□ -1.77
COL11A1P12107 AC067852.3-201ENST00000589177 561 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A1P12107 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A1P12107 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A1P12107 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 OR6C71P-202ENST00000641886 1107 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A1P12107 AC017007.4-201ENST00000503353 1352 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 BTBD10P1-201ENST00000549824 1352 ntBASIC4.02□□□□□ -1.77
COL11A1P12107 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A1P12107 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A1P12107 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
COL11A1P12107 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
COL11A1P12107 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
COL11A1P12107 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 AL357075.1-201ENST00000404107 726 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 SSR1P1-201ENST00000407630 814 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.01□□□□□ -1.77
COL11A1P12107 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.01□□□□□ -1.77
COL11A1P12107 AC097713.2-201ENST00000430199 356 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 RPS15AP29-201ENST00000445539 400 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 AC109925.1-201ENST00000478069 331 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 RPS29P2-201ENST00000479278 136 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 RN7SKP289-201ENST00000517244 295 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.01□□□□□ -1.77
COL11A1P12107 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.01□□□□□ -1.77
COL11A1P12107 CKS1BP3-201ENST00000600888 237 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 AL163642.2-201ENST00000604722 1019 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 AL137843.1-201ENST00000605078 385 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 AP003392.5-201ENST00000607857 415 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 AP003355.3-201ENST00000623465 114 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.01□□□□□ -1.77
COL11A1P12107 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 DDX6P1-205ENST00000441966 1436 ntBASIC4.01□□□□□ -1.77
COL11A1P12107 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A1P12107 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.01□□□□□ -1.77
COL11A1P12107 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL11A1P12107 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL11A1P12107 NACAP7-201ENST00000407371 609 ntBASIC4□□□□□ -1.77
COL11A1P12107 MTHFD2P2-201ENST00000407725 247 ntBASIC4□□□□□ -1.77
COL11A1P12107 BX323014.1-201ENST00000412876 237 ntBASIC4□□□□□ -1.77
COL11A1P12107 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4□□□□□ -1.77
COL11A1P12107 RPS20P1-201ENST00000434853 354 ntBASIC4□□□□□ -1.77
COL11A1P12107 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4□□□□□ -1.77
COL11A1P12107 AC233280.2-201ENST00000603917 1070 ntBASIC4□□□□□ -1.77
COL11A1P12107 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4□□□□□ -1.77
COL11A1P12107 AC138932.5-201ENST00000617759 563 ntBASIC4□□□□□ -1.77
COL11A1P12107 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4□□□□□ -1.77
COL11A1P12107 AL645937.1-201ENST00000641739 1652 ntBASIC4□□□□□ -1.77
COL11A1P12107 MFSD8-233ENST00000641482 4860 ntBASIC4□□□□□ -1.77
COL11A1P12107 MTCO1P46-201ENST00000451639 1491 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms