Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 MIR1271-201ENST00000408537 86 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AP000357.1-201ENST00000409926 1165 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 UBE2V1P11-201ENST00000411559 285 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 AL121878.1-201ENST00000418638 859 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 MTCO3P4-201ENST00000419236 787 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 AL138787.1-202ENST00000437804 898 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 CR769776.1-201ENST00000441254 787 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC239798.3-201ENST00000454459 408 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AC092691.2-201ENST00000461787 803 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 RPL23AP2-201ENST00000471227 466 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC146944.2-203ENST00000502493 354 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC139495.1-202ENST00000513164 354 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 RN7SKP46-201ENST00000515942 234 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 OSBPL9P5-201ENST00000542581 171 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC6P09630 ZNF971P-201ENST00000562068 1249 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 Z94722.1-201ENST00000604328 474 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AC067838.1-201ENST00000606064 577 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 RMST_10.1-201ENST00000616309 154 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.85□□□□□ -1.63
HOXC6P09630 AC022106.2-201ENST00000620114 757 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 AC039056.2-201ENST00000622261 511 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 BX649567.1-201ENST00000642071 1134 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 Z82217.1-201ENST00000625157 8149 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC6P09630 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC6P09630 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HOXC6P09630 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
HOXC6P09630 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HOXC6P09630 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC6P09630 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC6P09630 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC6P09630 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
HOXC6P09630 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC6P09630 MRPS36P3-201ENST00000519284 130 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC6P09630 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC6P09630 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC6P09630 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC6P09630 AL358913.1-201ENST00000554342 121 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC6P09630 AC106734.1-201ENST00000568646 663 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 MTND3P13-201ENST00000574391 343 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 CBX3P2-202ENST00000583365 535 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 VN1R78P-201ENST00000597393 564 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 BMS1P7-201ENST00000602440 1052 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC6P09630 AL022161.1-201ENST00000604390 213 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 AC064807.4-201ENST00000607201 407 ntBASIC4.84□□□□□ -1.63
HOXC6P09630 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms