Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RPL7P4-203ENST00000430239 730 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 YWHAEP5-201ENST00000431545 765 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC4P09017 PPIAP17-201ENST00000438507 471 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 AC239367.2-201ENST00000447309 705 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 CYCSP53-201ENST00000455540 265 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 TPRKBP1-201ENST00000456243 481 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 GAPDHP36-201ENST00000480688 918 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 ATG10-AS1-201ENST00000504846 648 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 AC108471.1-201ENST00000513977 287 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 HNRNPKP5-201ENST00000515300 253 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 RNA5SP164-201ENST00000516533 110 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC4P09017 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC4P09017 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC4P09017 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXC4P09017 AC107016.1-201ENST00000550463 337 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC4P09017 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXC4P09017 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC4P09017 AL359715.5-201ENST00000623431 443 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 RPL23AP61-201ENST00000623642 466 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC4P09017 AF001550.2-201ENST00000636643 217 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXC4P09017 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXC4P09017 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HOXC4P09017 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 AC027287.1-201ENST00000553115 1453 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC4P09017 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
HOXC4P09017 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC4P09017 RNU6-618P-201ENST00000363518 112 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC4P09017 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC4P09017 U1.1-201ENST00000384101 164 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 MIR554-201ENST00000384874 96 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 MIR199A2-201ENST00000385289 110 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 SNORA40.4-201ENST00000390971 128 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 RNU6ATAC-201ENST00000408749 126 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 BTF3P9-201ENST00000418784 283 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC4P09017 MTATP6P11-201ENST00000428071 670 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC4P09017 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC4P09017 AL500527.1-201ENST00000448532 255 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 AC239809.1-201ENST00000450470 217 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AL513343.1-201ENST00000451818 792 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC4P09017 RPL21P129-201ENST00000491732 478 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AC092045.1-201ENST00000495716 1231 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AC139783.2-201ENST00000504847 1145 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC4P09017 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXC4P09017 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 AC135001.1-201ENST00000544546 283 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC4P09017 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 AC068020.1-201ENST00000594215 661 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 AC015726.1-201ENST00000602353 681 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AC010200.2-201ENST00000605098 235 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC4P09017 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC4P09017 FP236240.3-201ENST00000623061 327 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AL773545.4-201ENST00000637262 310 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 AL513478.4-201ENST00000641636 310 ntBASIC3.86□□□□□ -1.79
HOXC4P09017 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC4P09017 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC4P09017 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC4P09017 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC4P09017 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HOXC4P09017 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HOXC4P09017 RN7SKP44-201ENST00000363602 316 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 MIR30B-201ENST00000384850 88 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 MIR513A2-201ENST00000385249 127 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 AMD1P2-201ENST00000412936 992 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC4P09017 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC4P09017 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms