Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC011472.4-201ENST00000615848 491 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AL121890.2-201ENST00000617644 465 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AC007546.1-201ENST00000619452 559 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AL121594.5-201ENST00000631724 573 ntBASIC4.83□□□□□ -1.64
MMP3P08254 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
MMP3P08254 VPS35P1-201ENST00000563400 1518 ntBASIC4.82□□□□□ -1.64
MMP3P08254 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
MMP3P08254 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 GTF2H2B-203ENST00000508065 1432 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 MAPK10-286ENST00000641208 8747 ntBASIC4.82□□□□□ -1.64
MMP3P08254 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 RNU6-353P-201ENST00000364266 108 ntBASIC4.82□□□□□ -1.64
MMP3P08254 RNA5SP283-201ENST00000365604 119 ntBASIC4.82□□□□□ -1.64
MMP3P08254 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.82□□□□□ -1.64
MMP3P08254 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 RNU4-31P-201ENST00000384211 141 ntBASIC4.82□□□□□ -1.64
MMP3P08254 RNU6-628P-201ENST00000410675 107 ntBASIC4.82□□□□□ -1.64
MMP3P08254 RN7SKP33-201ENST00000410942 340 ntBASIC4.82□□□□□ -1.64
MMP3P08254 SNORA74C-2-201ENST00000411179 201 ntBASIC4.82□□□□□ -1.64
MMP3P08254 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 RPL36AP36-201ENST00000418616 301 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.82□□□□□ -1.64
MMP3P08254 CDY14P-201ENST00000431260 1014 ntBASIC4.82□□□□□ -1.64
MMP3P08254 CDY12P-201ENST00000440679 1015 ntBASIC4.82□□□□□ -1.64
MMP3P08254 CDY13P-201ENST00000445813 1015 ntBASIC4.82□□□□□ -1.64
MMP3P08254 CDY23P-201ENST00000451661 1014 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AL132838.2-201ENST00000492041 314 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.82□□□□□ -1.64
MMP3P08254 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 AC020593.1-201ENST00000507399 299 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AP001636.2-201ENST00000525517 696 ntBASIC4.82□□□□□ -1.64
MMP3P08254 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.82□□□□□ -1.64
MMP3P08254 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.82□□□□□ -1.64
MMP3P08254 AC009097.3-201ENST00000563557 1018 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AC023813.2-201ENST00000564321 469 ntBASIC4.82□□□□□ -1.64
MMP3P08254 ATP5F1P7-201ENST00000567330 760 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.82□□□□□ -1.64
MMP3P08254 NIFKP6-201ENST00000598115 845 ntBASIC4.82□□□□□ -1.64
MMP3P08254 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 AC021755.4-201ENST00000616620 456 ntBASIC4.82□□□□□ -1.64
MMP3P08254 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.82□□□□□ -1.64
MMP3P08254 AC112484.5-201ENST00000624189 228 ntBASIC4.82□□□□□ -1.64
MMP3P08254 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
MMP3P08254 MTND2P41-201ENST00000637599 773 ntBASIC4.82□□□□□ -1.64
MMP3P08254 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.82□□□□□ -1.64
MMP3P08254 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
MMP3P08254 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MMP3P08254 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
MMP3P08254 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 MTND4P10-201ENST00000446199 1363 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC111188.2-201ENST00000529697 1387 ntBASIC4.81□□□□□ -1.64
MMP3P08254 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP3P08254 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 AL022393.1-201ENST00000625142 1677 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC021242.1-201ENST00000507315 2035 ntBASIC4.81□□□□□ -1.64
MMP3P08254 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 RNA5SP307-201ENST00000362863 116 ntBASIC4.81□□□□□ -1.64
MMP3P08254 BMS1P3-201ENST00000372011 932 ntBASIC4.81□□□□□ -1.64
MMP3P08254 MTND4P13-201ENST00000402078 1023 ntBASIC4.81□□□□□ -1.64
MMP3P08254 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP3P08254 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP3P08254 HIGD1AP12-201ENST00000427832 281 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AL117339.2-201ENST00000430475 180 ntBASIC4.81□□□□□ -1.64
MMP3P08254 RPL23AP25-201ENST00000430973 463 ntBASIC4.81□□□□□ -1.64
MMP3P08254 RPEP2-201ENST00000432149 701 ntBASIC4.81□□□□□ -1.64
MMP3P08254 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP3P08254 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.81□□□□□ -1.64
MMP3P08254 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP3P08254 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 AC092170.1-201ENST00000440211 356 ntBASIC4.81□□□□□ -1.64
MMP3P08254 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 Z95327.1-201ENST00000446082 482 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC004022.1-201ENST00000447766 1066 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC005410.1-202ENST00000460347 485 ntBASIC4.81□□□□□ -1.64
MMP3P08254 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP3P08254 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.81□□□□□ -1.64
MMP3P08254 KCTD9P2-201ENST00000512203 1013 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC099522.1-202ENST00000514718 367 ntBASIC4.81□□□□□ -1.64
MMP3P08254 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP3P08254 RNU6-513P-201ENST00000516104 104 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP3P08254 HMGB1P1-201ENST00000522557 636 ntBASIC4.81□□□□□ -1.64
MMP3P08254 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms