Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.11□□□□□ -1.91
CTSDP07339 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSDP07339 CASC19-261ENST00000641853 1638 ntBASIC3.11□□□□□ -1.91
CTSDP07339 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSDP07339 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.1□□□□□ -1.91
CTSDP07339 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.1□□□□□ -1.91
CTSDP07339 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 AC058791.1-201ENST00000608412 3198 ntBASIC3.1□□□□□ -1.91
CTSDP07339 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 RNU6-1331P-201ENST00000363658 106 ntBASIC3.1□□□□□ -1.91
CTSDP07339 RNA5SP97-201ENST00000365006 84 ntBASIC3.1□□□□□ -1.91
CTSDP07339 RNU6-146P-201ENST00000384602 108 ntBASIC3.1□□□□□ -1.91
CTSDP07339 RNA5SP424-201ENST00000390988 115 ntBASIC3.1□□□□□ -1.91
CTSDP07339 ST13P16-201ENST00000401760 781 ntBASIC3.1□□□□□ -1.91
CTSDP07339 MTCO3P31-201ENST00000405526 789 ntBASIC3.1□□□□□ -1.91
CTSDP07339 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.1□□□□□ -1.91
CTSDP07339 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSDP07339 AL049610.1-201ENST00000423374 372 ntBASIC3.1□□□□□ -1.91
CTSDP07339 COX6CP15-201ENST00000426313 211 ntBASIC3.1□□□□□ -1.91
CTSDP07339 AL691449.1-201ENST00000426570 421 ntBASIC3.1□□□□□ -1.91
CTSDP07339 AL158071.1-201ENST00000430315 461 ntBASIC3.1□□□□□ -1.91
CTSDP07339 NDUFB1P1-201ENST00000435191 180 ntBASIC3.1□□□□□ -1.91
CTSDP07339 Z74696.2-201ENST00000436514 498 ntBASIC3.1□□□□□ -1.91
CTSDP07339 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSDP07339 RPL7P31-201ENST00000450192 724 ntBASIC3.1□□□□□ -1.91
CTSDP07339 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.1□□□□□ -1.91
CTSDP07339 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.1□□□□□ -1.91
CTSDP07339 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
CTSDP07339 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.1□□□□□ -1.91
CTSDP07339 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSDP07339 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSDP07339 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.1□□□□□ -1.91
CTSDP07339 SNORA62.6-201ENST00000606322 83 ntBASIC3.1□□□□□ -1.91
CTSDP07339 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.1□□□□□ -1.91
CTSDP07339 AC004241.3-201ENST00000611728 517 ntBASIC3.1□□□□□ -1.91
CTSDP07339 AP003072.5-201ENST00000623872 773 ntBASIC3.1□□□□□ -1.91
CTSDP07339 AC004943.3-201ENST00000624116 600 ntBASIC3.1□□□□□ -1.91
CTSDP07339 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSDP07339 AL732372.2-225ENST00000642124 456 ntBASIC3.1□□□□□ -1.91
CTSDP07339 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CTSDP07339 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSDP07339 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CTSDP07339 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.1□□□□□ -1.91
CTSDP07339 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
CTSDP07339 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.09□□□□□ -1.91
CTSDP07339 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 RIOK3P1-201ENST00000418778 1528 ntBASIC3.09□□□□□ -1.91
CTSDP07339 ZNF826P-207ENST00000622273 1910 ntBASIC3.09□□□□□ -1.91
CTSDP07339 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.09□□□□□ -1.91
CTSDP07339 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 RNA5SP235-201ENST00000365411 114 ntBASIC3.09□□□□□ -1.91
CTSDP07339 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 MT-RNR1-201ENST00000389680 954 ntBASIC3.09□□□□□ -1.91
CTSDP07339 PTMAP5-201ENST00000393073 333 ntBASIC3.09□□□□□ -1.91
CTSDP07339 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
CTSDP07339 AC069218.2-201ENST00000411665 344 ntBASIC3.09□□□□□ -1.91
CTSDP07339 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 AC244033.1-201ENST00000426826 870 ntBASIC3.09□□□□□ -1.91
CTSDP07339 USP9YP31-201ENST00000431405 881 ntBASIC3.09□□□□□ -1.91
CTSDP07339 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.09□□□□□ -1.91
CTSDP07339 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 AL356276.2-201ENST00000435919 558 ntBASIC3.09□□□□□ -1.91
CTSDP07339 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.09□□□□□ -1.91
CTSDP07339 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 TXNP1-201ENST00000441872 371 ntBASIC3.09□□□□□ -1.91
CTSDP07339 CASP3P1-201ENST00000446037 609 ntBASIC3.09□□□□□ -1.91
CTSDP07339 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 AC006539.3-201ENST00000454258 129 ntBASIC3.09□□□□□ -1.91
CTSDP07339 RPL7AP52-201ENST00000458096 790 ntBASIC3.09□□□□□ -1.91
CTSDP07339 RPL23AP62-201ENST00000463396 453 ntBASIC3.09□□□□□ -1.91
CTSDP07339 PPIAP21-201ENST00000464473 501 ntBASIC3.09□□□□□ -1.91
CTSDP07339 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CTSDP07339 CYCSP20-201ENST00000473154 315 ntBASIC3.09□□□□□ -1.91
CTSDP07339 HMGB3P14-201ENST00000494195 599 ntBASIC3.09□□□□□ -1.91
CTSDP07339 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.09□□□□□ -1.91
CTSDP07339 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.09□□□□□ -1.91
CTSDP07339 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 AC234775.3-201ENST00000564612 656 ntBASIC3.09□□□□□ -1.91
CTSDP07339 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.09□□□□□ -1.91
CTSDP07339 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSDP07339 AP005901.4-201ENST00000577336 569 ntBASIC3.09□□□□□ -1.91
CTSDP07339 MTND2P13-201ENST00000577438 1039 ntBASIC3.09□□□□□ -1.91
CTSDP07339 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.09□□□□□ -1.91
CTSDP07339 AC083809.1-201ENST00000615051 472 ntBASIC3.09□□□□□ -1.91
CTSDP07339 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSDP07339 AC090506.2-201ENST00000624521 419 ntBASIC3.09□□□□□ -1.91
CTSDP07339 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms