Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 DUXAP1-201ENST00000556632 463 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 VN1R90P-201ENST00000595717 726 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 NTAN1P1-201ENST00000603150 646 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 MLECP1-201ENST00000615893 709 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 FRG1HP-204ENST00000617940 757 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 OR1S1-201ENST00000624470 978 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 CASC19-206ENST00000641028 1430 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 RNA5SP509-201ENST00000364577 119 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 Y_RNA.559-201ENST00000384686 107 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AL590084.2-201ENST00000401481 382 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 MTCO3P41-201ENST00000414801 328 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC006960.1-201ENST00000419980 153 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 CKS1BP6-201ENST00000424932 240 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 RPS12P10-201ENST00000427031 377 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 ISCUP1-201ENST00000454451 448 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 RPL23AP24-201ENST00000458203 385 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC068587.1-201ENST00000483613 781 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 NIP7P2-201ENST00000485801 544 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC068724.1-201ENST00000487100 792 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 MTCO2P32-201ENST00000514865 403 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 AP000827.1-201ENST00000527814 258 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 NBEAP1-201ENST00000554452 979 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC068831.4-201ENST00000556118 109 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC136624.4-201ENST00000573044 370 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 MIR4675-201ENST00000577898 77 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 RSL24D1P11-201ENST00000591045 491 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC090948.1-201ENST00000607464 549 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 AC015804.1-201ENST00000622935 435 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AF246928.1-201ENST00000623768 87 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AP003072.4-201ENST00000624580 310 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 MIR6830-201ENST00000636015 70 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 AL391684.1-202ENST00000641293 1636 ntBASIC5.43□□□□□ -1.54
HLA-DOAP06340 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOAP06340 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOAP06340 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DOAP06340 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DOAP06340 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DOAP06340 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DOAP06340 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 Y_RNA.192-201ENST00000363977 102 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 snoZ40.1-201ENST00000364540 72 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 RNU6-1263P-201ENST00000384601 106 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 Y_RNA.560-201ENST00000384689 102 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 MIR659-201ENST00000384963 97 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 RNU6-316P-201ENST00000391027 107 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 RPL23AP59-201ENST00000399415 461 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 RNU6-757P-201ENST00000410334 100 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC027644.1-201ENST00000419595 298 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC006366.1-201ENST00000422002 759 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DOAP06340 YWHAEP5-201ENST00000431545 765 ntBASIC5.42□□□□□ -1.54
HLA-DOAP06340 AC011998.1-201ENST00000433403 117 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms