Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RPL23AP12-201ENST00000467573 473 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 CDH12P2-201ENST00000504393 298 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RNU1-45P-201ENST00000517191 141 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC006130.2-201ENST00000586202 326 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC093227.2-201ENST00000589357 285 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC005972.3-201ENST00000606304 481 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC012557.1-201ENST00000607115 611 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC090971.4-201ENST00000560291 1800 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 RPL21P17-201ENST00000397467 475 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 KCTD10P1-201ENST00000434203 625 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 MTCO3P16-201ENST00000454456 754 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 RN7SL542P-201ENST00000467147 294 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 HMGN1P11-201ENST00000508668 303 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 SNORA70.18-201ENST00000516696 98 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 snoU109.6-201ENST00000516831 118 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 IGLVIV-53-201ENST00000520107 367 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC025946.2-201ENST00000603398 234 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC112230.1-201ENST00000604342 547 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC115621.1-201ENST00000604653 858 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AL109618.2-201ENST00000605527 211 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC244205.2-202ENST00000635781 342 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AL031985.3-201ENST00000565390 2449 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQB2P05538 ZNF285B-201ENST00000561698 1767 ntBASIC3.66□□□□□ -1.82
HLA-DQB2P05538 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.65□□□□□ -1.82
HLA-DQB2P05538 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DQB2P05538 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
HLA-DQB2P05538 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DQB2P05538 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.65□□□□□ -1.82
HLA-DQB2P05538 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 RNA5SP502-201ENST00000362694 119 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 RNU6ATAC-201ENST00000408749 126 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 RAB9AP3-201ENST00000412737 573 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 DBIP2-201ENST00000419076 262 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 RPL7P28-201ENST00000437739 740 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC074367.1-201ENST00000438685 1125 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AL035551.1-201ENST00000446931 348 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AL359073.1-201ENST00000448036 403 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 RAB9AP1-201ENST00000449393 573 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC084357.1-201ENST00000473404 255 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC037198.2-201ENST00000478845 733 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 RPS3AP50-201ENST00000487064 803 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC108043.1-201ENST00000512696 574 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC025423.2-201ENST00000537570 439 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AL020997.2-201ENST00000602607 184 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC004241.3-201ENST00000611728 517 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC016957.2-201ENST00000616998 848 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AC039056.2-201ENST00000622261 511 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 AP003400.2-201ENST00000624036 666 ntBASIC3.65□□□□□ -1.83
HLA-DQB2P05538 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQB2P05538 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 MIR134-201ENST00000385258 73 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 RPL17P36-201ENST00000420302 549 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms