Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
LDLRP01130 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.44□□□□□ -1.7
LDLRP01130 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.44□□□□□ -1.7
LDLRP01130 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LDLRP01130 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LDLRP01130 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LDLRP01130 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.43□□□□□ -1.7
LDLRP01130 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 ZNF29P-201ENST00000225587 168 ntBASIC4.43□□□□□ -1.7
LDLRP01130 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LDLRP01130 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LDLRP01130 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 RNU1-85P-201ENST00000364127 164 ntBASIC4.43□□□□□ -1.7
LDLRP01130 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 MIR129-1-201ENST00000384972 72 ntBASIC4.43□□□□□ -1.7
LDLRP01130 ZNF602P-201ENST00000405929 924 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.43□□□□□ -1.7
LDLRP01130 AC092745.2-202ENST00000411880 369 ntBASIC4.43□□□□□ -1.7
LDLRP01130 TAF13P2-201ENST00000416876 286 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AL449283.1-202ENST00000418249 604 ntBASIC4.43□□□□□ -1.7
LDLRP01130 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.43□□□□□ -1.7
LDLRP01130 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 AL365338.1-201ENST00000422282 858 ntBASIC4.43□□□□□ -1.7
LDLRP01130 RPL12P34-201ENST00000424532 479 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDLRP01130 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 RPS26P30-201ENST00000443431 335 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDLRP01130 SLC25A18P1-201ENST00000449385 454 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.43□□□□□ -1.7
LDLRP01130 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 RPL5P30-201ENST00000465511 891 ntBASIC4.43□□□□□ -1.7
LDLRP01130 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.43□□□□□ -1.7
LDLRP01130 RPL21P129-201ENST00000491732 478 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC023050.1-201ENST00000498198 304 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC026414.1-201ENST00000504046 698 ntBASIC4.43□□□□□ -1.7
LDLRP01130 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.43□□□□□ -1.7
LDLRP01130 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.43□□□□□ -1.7
LDLRP01130 RN7SKP287-201ENST00000516546 266 ntBASIC4.43□□□□□ -1.7
LDLRP01130 RNU6-347P-201ENST00000516658 105 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 DYNLL1P4-201ENST00000549314 266 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.43□□□□□ -1.7
LDLRP01130 AC093249.4-201ENST00000564755 259 ntBASIC4.43□□□□□ -1.7
LDLRP01130 MTCYBP28-201ENST00000566728 1132 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AL121834.1-201ENST00000572284 509 ntBASIC4.43□□□□□ -1.7
LDLRP01130 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 CCDC58P3-201ENST00000590792 430 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC093424.1-201ENST00000604999 338 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC010200.2-201ENST00000605098 235 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AL121932.1-201ENST00000605542 214 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC008966.2-201ENST00000606157 453 ntBASIC4.43□□□□□ -1.7
LDLRP01130 MIR6716-201ENST00000613413 80 ntBASIC4.43□□□□□ -1.7
LDLRP01130 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LDLRP01130 AC023509.5-201ENST00000617434 807 ntBASIC4.43□□□□□ -1.7
LDLRP01130 MIR6853-201ENST00000619642 74 ntBASIC4.43□□□□□ -1.7
LDLRP01130 AC026422.1-201ENST00000623961 452 ntBASIC4.43□□□□□ -1.7
LDLRP01130 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.43□□□□□ -1.7
LDLRP01130 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
LDLRP01130 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LDLRP01130 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LDLRP01130 OR14L1P-202ENST00000641545 3009 ntBASIC4.43□□□□□ -1.7
LDLRP01130 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LDLRP01130 AL355852.1-201ENST00000454081 1771 ntBASIC4.42□□□□□ -1.7
LDLRP01130 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 AC027290.2-201ENST00000623210 18662 ntBASIC4.42□□□□□ -1.7
LDLRP01130 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.42□□□□□ -1.7
LDLRP01130 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
LDLRP01130 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LDLRP01130 RNU6-984P-201ENST00000363236 109 ntBASIC4.42□□□□□ -1.7
LDLRP01130 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 ATP5F1P2-201ENST00000398143 760 ntBASIC4.42□□□□□ -1.7
LDLRP01130 RN7SKP263-201ENST00000411194 309 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.42□□□□□ -1.7
LDLRP01130 USP9YP21-201ENST00000420603 432 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 IPMKP1-201ENST00000425988 855 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AL732292.1-201ENST00000426692 226 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.42□□□□□ -1.7
LDLRP01130 CEACAMP6-201ENST00000452007 574 ntBASIC4.42□□□□□ -1.7
LDLRP01130 DNAJC19P8-201ENST00000452887 259 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC005229.2-201ENST00000456995 399 ntBASIC4.42□□□□□ -1.7
LDLRP01130 RNU7-140P-201ENST00000459546 60 ntBASIC4.42□□□□□ -1.7
LDLRP01130 AC010627.1-201ENST00000503819 1294 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms