Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN9O95484 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CLDN9O95484 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN9O95484 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN9O95484 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN9O95484 RNU6-883P-201ENST00000384597 107 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 OR6C69P-201ENST00000394268 893 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 RPL7AP73-201ENST00000413490 353 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 RAC1P3-201ENST00000416129 580 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AC234782.4-201ENST00000417646 1048 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN9O95484 MTND4P24-201ENST00000424002 397 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 MTND4LP7-201ENST00000431728 294 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 ZNF965P-201ENST00000432501 817 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 ATP5HP2-201ENST00000433885 485 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 KCTD9P3-201ENST00000434597 1169 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL353093.1-201ENST00000441292 436 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC239367.2-201ENST00000447309 705 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 RPS23P7-201ENST00000466210 444 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AC069499.1-201ENST00000489433 509 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 FTH1P24-201ENST00000503502 462 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC022790.1-201ENST00000522872 204 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.87□□□□□ -1.79
CLDN9O95484 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.87□□□□□ -1.79
CLDN9O95484 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 POLR2KP1-201ENST00000553226 168 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC069366.1-201ENST00000583159 838 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AC069304.3-201ENST00000603938 1084 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN9O95484 AC104307.1-201ENST00000616142 196 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AC025016.1-201ENST00000616746 682 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL445567.2-201ENST00000618935 498 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN9O95484 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN9O95484 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN9O95484 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLDN9O95484 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.87□□□□□ -1.79
CLDN9O95484 BDP1P-201ENST00000582658 1990 ntBASIC3.87□□□□□ -1.79
CLDN9O95484 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN9O95484 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.87□□□□□ -1.79
CLDN9O95484 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN9O95484 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN9O95484 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CLDN9O95484 MAPK10-373ENST00000641983 6772 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN9O95484 AL133412.1-201ENST00000380194 2992 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN9O95484 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN9O95484 RAD1P1-201ENST00000231383 813 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 RNA5SP479-201ENST00000364858 117 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLDN9O95484 ENSAP1-201ENST00000392855 326 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 NPM1P10-201ENST00000398310 865 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN9O95484 HMGB1P13-201ENST00000406019 642 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 TPT1P2-201ENST00000413105 503 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 LINC01347-201ENST00000417964 355 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN9O95484 HIGD1AP4-201ENST00000430194 280 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN9O95484 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN9O95484 MRPL50P1-201ENST00000431951 384 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 HMGB1P37-201ENST00000439613 609 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN9O95484 NUTF2P3-201ENST00000448540 384 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 MTATP6P22-201ENST00000507369 598 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AC109458.1-201ENST00000508858 316 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AC026726.1-201ENST00000512859 601 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 IGLVIV-53-201ENST00000520107 367 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN9O95484 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN9O95484 AC091516.1-201ENST00000549191 703 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AL161713.1-201ENST00000555538 145 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN9O95484 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN9O95484 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN9O95484 MIR1254-2-201ENST00000579553 63 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN9O95484 RN7SL600P-201ENST00000581811 299 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 MIR3939-201ENST00000582614 106 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN9O95484 AC068790.5-201ENST00000602741 355 ntBASIC3.86□□□□□ -1.79
CLDN9O95484 AL590392.1-201ENST00000604960 446 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms