Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 AC126755.2-208ENST00000327792 462 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AC138969.1-213ENST00000331436 462 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 RNA5SP130-201ENST00000364431 114 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 SNORA70C-201ENST00000384538 135 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 SNORA11B-201ENST00000408175 129 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AL356095.1-201ENST00000417217 199 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 RPL30P3-201ENST00000424262 333 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 HMGB3P5-201ENST00000428894 612 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 CACYBPP1-201ENST00000438592 684 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 BUD31P2-201ENST00000449374 300 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 RPS11P1-201ENST00000451072 473 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 TVP23BP2-201ENST00000455082 615 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 RPS23P7-201ENST00000466210 444 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AC007537.2-201ENST00000472093 511 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 RPL7P24-201ENST00000493052 752 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AC108471.1-201ENST00000513977 287 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 SNORA31.9-201ENST00000516429 84 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 NARSP2-201ENST00000518524 679 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.78□□□□□ -1.8
SEMA3DO95025 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
SEMA3DO95025 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.78□□□□□ -1.8
SEMA3DO95025 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.78□□□□□ -1.8
SEMA3DO95025 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
SEMA3DO95025 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 USP8P1-201ENST00000494673 3183 ntBASIC3.78□□□□□ -1.8
SEMA3DO95025 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SEMA3DO95025 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
SEMA3DO95025 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.8
SEMA3DO95025 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.78□□□□□ -1.8
SEMA3DO95025 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 RPS4XP5-202ENST00000449995 1334 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 DCAF13P3-201ENST00000561147 1334 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.77□□□□□ -1.81
SEMA3DO95025 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 RNA5SP167-201ENST00000365461 116 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 RNU6-328P-201ENST00000390887 106 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 AL034374.1-201ENST00000406329 351 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.77□□□□□ -1.81
SEMA3DO95025 AL365396.1-201ENST00000430854 671 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 H2AFZP6-201ENST00000444403 394 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.77□□□□□ -1.81
SEMA3DO95025 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.77□□□□□ -1.81
SEMA3DO95025 CALM1P2-201ENST00000452941 448 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.77□□□□□ -1.81
SEMA3DO95025 NDUFA5P9-201ENST00000472609 340 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.77□□□□□ -1.81
SEMA3DO95025 STRADBP1-201ENST00000478954 1281 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 MTND3P6-201ENST00000485242 339 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 AC026979.1-201ENST00000492525 396 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 Vault.1-201ENST00000516474 102 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 AC087369.1-201ENST00000520775 996 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.77□□□□□ -1.81
SEMA3DO95025 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.77□□□□□ -1.81
SEMA3DO95025 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.77□□□□□ -1.81
SEMA3DO95025 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 AC020910.2-201ENST00000603635 610 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 MIR6830-201ENST00000636015 70 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.77□□□□□ -1.81
SEMA3DO95025 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SEMA3DO95025 SAGE2P-201ENST00000420011 2126 ntBASIC3.77□□□□□ -1.81
SEMA3DO95025 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SEMA3DO95025 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SEMA3DO95025 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.76□□□□□ -1.81
SEMA3DO95025 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.76□□□□□ -1.81
SEMA3DO95025 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SEMA3DO95025 RNU6-564P-201ENST00000410983 104 ntBASIC3.76□□□□□ -1.81
SEMA3DO95025 AL691449.1-201ENST00000426570 421 ntBASIC3.76□□□□□ -1.81
SEMA3DO95025 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.76□□□□□ -1.81
SEMA3DO95025 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.76□□□□□ -1.81
SEMA3DO95025 TPTE2P1-204ENST00000435256 593 ntBASIC3.76□□□□□ -1.81
SEMA3DO95025 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.76□□□□□ -1.81
SEMA3DO95025 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.76□□□□□ -1.81
SEMA3DO95025 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.76□□□□□ -1.81
SEMA3DO95025 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.76□□□□□ -1.81
SEMA3DO95025 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.76□□□□□ -1.81
SEMA3DO95025 SNORD108-201ENST00000459332 71 ntBASIC3.76□□□□□ -1.81
SEMA3DO95025 AP000873.1-201ENST00000463987 400 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms