Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 HSPD1P14-201ENST00000432666 1618 ntBASIC1.59□□□□□ -2.16
USH2AO75445 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC1.59□□□□□ -2.16
USH2AO75445 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC1.59□□□□□ -2.16
USH2AO75445 AC008694.2-201ENST00000517591 306 ntBASIC1.59□□□□□ -2.16
USH2AO75445 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.59□□□□□ -2.16
USH2AO75445 ISCA1P3-201ENST00000577104 373 ntBASIC1.59□□□□□ -2.16
USH2AO75445 AP001004.1-201ENST00000582468 324 ntBASIC1.59□□□□□ -2.16
USH2AO75445 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC1.59□□□□□ -2.16
USH2AO75445 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 AL022323.4-201ENST00000623980 13120 ntBASIC1.59□□□□□ -2.16
USH2AO75445 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC1.59□□□□□ -2.16
USH2AO75445 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
USH2AO75445 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 MIR764-201ENST00000390811 85 ntBASIC1.58□□□□□ -2.16
USH2AO75445 U3.19-201ENST00000390893 196 ntBASIC1.58□□□□□ -2.16
USH2AO75445 HMGN1P24-201ENST00000412282 298 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC1.58□□□□□ -2.16
USH2AO75445 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC1.58□□□□□ -2.16
USH2AO75445 AL358913.1-201ENST00000554342 121 ntBASIC1.58□□□□□ -2.16
USH2AO75445 ATP5F1P7-201ENST00000567330 760 ntBASIC1.58□□□□□ -2.16
USH2AO75445 SNORA62.6-201ENST00000606322 83 ntBASIC1.58□□□□□ -2.16
USH2AO75445 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 AC010300.1-201ENST00000600671 5134 ntBASIC1.58□□□□□ -2.16
USH2AO75445 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 RN7SKP53-201ENST00000411337 315 ntBASIC1.58□□□□□ -2.16
USH2AO75445 Z99755.1-201ENST00000414048 380 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC063979.1-201ENST00000415539 377 ntBASIC1.58□□□□□ -2.16
USH2AO75445 TEX41-204ENST00000423031 491 ntTSL 4 BASIC1.58□□□□□ -2.16
USH2AO75445 RPL21P40-201ENST00000428586 483 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC073069.1-201ENST00000428657 441 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.58□□□□□ -2.16
USH2AO75445 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 RNA5SP458-201ENST00000516188 119 ntBASIC1.58□□□□□ -2.16
USH2AO75445 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 IGKV2OR2-8-201ENST00000558710 300 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.58□□□□□ -2.16
USH2AO75445 AC008966.2-201ENST00000606157 453 ntBASIC1.58□□□□□ -2.16
USH2AO75445 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 FRG1CP-201ENST00000358464 769 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC234772.1-201ENST00000377927 937 ntBASIC1.58□□□□□ -2.16
USH2AO75445 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC1.58□□□□□ -2.16
USH2AO75445 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC1.58□□□□□ -2.16
USH2AO75445 AC006028.1-201ENST00000438379 402 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AL157385.1-201ENST00000446973 268 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC1.58□□□□□ -2.16
USH2AO75445 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC1.58□□□□□ -2.16
USH2AO75445 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC1.58□□□□□ -2.16
USH2AO75445 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 AC016727.1-205ENST00000605437 569 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC009570.1-201ENST00000609599 745 ntBASIC1.58□□□□□ -2.16
USH2AO75445 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
USH2AO75445 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
USH2AO75445 MIR512-1-201ENST00000384913 84 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AL391417.1-201ENST00000404100 426 ntBASIC1.58□□□□□ -2.16
USH2AO75445 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
USH2AO75445 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 AC022968.1-201ENST00000567372 442 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC1.58□□□□□ -2.16
USH2AO75445 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC1.58□□□□□ -2.16
USH2AO75445 AL158827.2-201ENST00000602494 330 ntBASIC1.58□□□□□ -2.16
USH2AO75445 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 AP003485.2-201ENST00000623636 610 ntBASIC1.58□□□□□ -2.16
USH2AO75445 AL691447.3-201ENST00000635020 330 ntBASIC1.58□□□□□ -2.16
USH2AO75445 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC1.58□□□□□ -2.16
USH2AO75445 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH2AO75445 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC1.57□□□□□ -2.16
USH2AO75445 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC1.57□□□□□ -2.16
USH2AO75445 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms