Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT3O75175 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.71□□□□□ -1.66
CNOT3O75175 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.71□□□□□ -1.66
CNOT3O75175 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT3O75175 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT3O75175 AC138393.1-206ENST00000540997 1886 ntBASIC4.71□□□□□ -1.66
CNOT3O75175 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT3O75175 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT3O75175 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT3O75175 OR10J6P-201ENST00000289731 930 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 RNA5SP191-201ENST00000362585 102 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 RNA5SP443-201ENST00000363083 132 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 RNU6-304P-201ENST00000364855 107 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CNOT3O75175 RNU6-192P-201ENST00000391253 100 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 AL121978.1-201ENST00000402778 359 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 RNU6-757P-201ENST00000410334 100 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 Y_RNA.619-201ENST00000410951 90 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC013404.1-201ENST00000413068 249 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC105402.1-201ENST00000413336 545 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 ATG4AP1-201ENST00000416893 538 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC004074.1-201ENST00000421810 1063 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT3O75175 OR5AW1P-201ENST00000426334 1006 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT3O75175 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 USP9YP9-201ENST00000429406 715 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 AL353093.1-201ENST00000441292 436 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT3O75175 RPS29P33-201ENST00000456717 146 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 MTCO3P7-201ENST00000510008 774 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT3O75175 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT3O75175 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 EDDM3DP-201ENST00000554692 434 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC027104.1-201ENST00000563702 681 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 BGLT3-201ENST00000564523 994 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.7□□□□□ -1.66
CNOT3O75175 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT3O75175 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC245297.2-201ENST00000610119 565 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 AC022509.4-201ENST00000621404 572 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 AC087190.4-201ENST00000574616 8334 ntBASIC4.7□□□□□ -1.66
CNOT3O75175 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CNOT3O75175 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT3O75175 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
CNOT3O75175 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT3O75175 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CNOT3O75175 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CNOT3O75175 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT3O75175 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT3O75175 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CNOT3O75175 Y_RNA.194-201ENST00000363985 102 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 SNORA70.10-201ENST00000384515 134 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 Y_RNA.560-201ENST00000384689 102 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CNOT3O75175 TAF9BP1-201ENST00000396646 746 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 HMGB3P7-201ENST00000400214 611 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 FABP12P1-201ENST00000401911 322 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 GSTA8P-201ENST00000404253 637 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 U3.32-201ENST00000408116 212 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 Y_RNA.599-201ENST00000410489 109 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 AC009237.10-201ENST00000414112 510 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT3O75175 MTCO1P21-201ENST00000416634 589 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT3O75175 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT3O75175 MTCO3P30-201ENST00000426425 670 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT3O75175 AC129850.1-201ENST00000436203 508 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 YWHAZP7-201ENST00000436906 631 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 MTND4P6-201ENST00000438297 472 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT3O75175 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.69□□□□□ -1.66
CNOT3O75175 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT3O75175 RPL7AP61-201ENST00000443410 636 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.69□□□□□ -1.66
CNOT3O75175 RPL36AP15-201ENST00000444514 266 ntBASIC4.69□□□□□ -1.66
CNOT3O75175 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT3O75175 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms