Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDC3O75056 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.13□□□□□ -1.75
SDC3O75056 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDC3O75056 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SDC3O75056 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SDC3O75056 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDC3O75056 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.13□□□□□ -1.75
SDC3O75056 AC027290.2-201ENST00000623210 18662 ntBASIC4.13□□□□□ -1.75
SDC3O75056 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.12□□□□□ -1.75
SDC3O75056 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
SDC3O75056 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SDC3O75056 RNU6-252P-201ENST00000363232 107 ntBASIC4.12□□□□□ -1.75
SDC3O75056 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 RNA5SP171-201ENST00000391071 115 ntBASIC4.12□□□□□ -1.75
SDC3O75056 HSPD1P16-201ENST00000402302 394 ntBASIC4.12□□□□□ -1.75
SDC3O75056 RNU4-6P-201ENST00000410804 122 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.12□□□□□ -1.75
SDC3O75056 VDAC1P9-201ENST00000412766 841 ntBASIC4.12□□□□□ -1.75
SDC3O75056 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SDC3O75056 AC234782.4-201ENST00000417646 1048 ntBASIC4.12□□□□□ -1.75
SDC3O75056 OR8F1P-201ENST00000425243 930 ntBASIC4.12□□□□□ -1.75
SDC3O75056 DYNLL1P7-201ENST00000429273 258 ntBASIC4.12□□□□□ -1.75
SDC3O75056 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 RPL23AP46-201ENST00000438548 490 ntBASIC4.12□□□□□ -1.75
SDC3O75056 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.12□□□□□ -1.75
SDC3O75056 AL162388.1-201ENST00000450912 352 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.12□□□□□ -1.75
SDC3O75056 RPL37P3-201ENST00000456825 293 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AC079804.1-201ENST00000461922 436 ntBASIC4.12□□□□□ -1.75
SDC3O75056 RPS6P4-201ENST00000494693 758 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AC010468.3-201ENST00000508225 458 ntBASIC4.12□□□□□ -1.75
SDC3O75056 NPM1P41-201ENST00000512920 831 ntBASIC4.12□□□□□ -1.75
SDC3O75056 RNA5SP154-201ENST00000516193 111 ntBASIC4.12□□□□□ -1.75
SDC3O75056 CYCSP28-201ENST00000534284 321 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.12□□□□□ -1.75
SDC3O75056 AC025260.1-201ENST00000548858 430 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.12□□□□□ -1.75
SDC3O75056 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.12□□□□□ -1.75
SDC3O75056 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.12□□□□□ -1.75
SDC3O75056 MTND6P33-201ENST00000571794 183 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AC027455.1-201ENST00000574104 594 ntBASIC4.12□□□□□ -1.75
SDC3O75056 SLC25A36P1-201ENST00000590111 465 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 AC112200.1-201ENST00000625015 234 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AC097372.4-201ENST00000625025 466 ntBASIC4.12□□□□□ -1.75
SDC3O75056 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.12□□□□□ -1.75
SDC3O75056 FRG1DP-201ENST00000635586 771 ntBASIC4.12□□□□□ -1.75
SDC3O75056 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SDC3O75056 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SDC3O75056 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.12□□□□□ -1.75
SDC3O75056 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SDC3O75056 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SDC3O75056 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SDC3O75056 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SDC3O75056 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SDC3O75056 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.11□□□□□ -1.75
SDC3O75056 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SDC3O75056 RNA5SP502-201ENST00000362694 119 ntBASIC4.11□□□□□ -1.75
SDC3O75056 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SDC3O75056 RNU1-44P-201ENST00000384453 163 ntBASIC4.11□□□□□ -1.75
SDC3O75056 RNA5SP104-201ENST00000410989 118 ntBASIC4.11□□□□□ -1.75
SDC3O75056 XKRYP4-201ENST00000414395 483 ntBASIC4.11□□□□□ -1.75
SDC3O75056 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.11□□□□□ -1.75
SDC3O75056 AL031736.2-201ENST00000426573 787 ntBASIC4.11□□□□□ -1.75
SDC3O75056 RPL17P35-201ENST00000432217 549 ntBASIC4.11□□□□□ -1.75
SDC3O75056 AL590762.3-201ENST00000436372 640 ntBASIC4.11□□□□□ -1.75
SDC3O75056 AC097499.1-201ENST00000444277 208 ntBASIC4.11□□□□□ -1.75
SDC3O75056 XKRYP5-201ENST00000449659 483 ntBASIC4.11□□□□□ -1.75
SDC3O75056 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.11□□□□□ -1.75
SDC3O75056 RPS26P28-201ENST00000470806 348 ntBASIC4.11□□□□□ -1.75
SDC3O75056 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.11□□□□□ -1.75
SDC3O75056 AP002812.1-201ENST00000495378 474 ntBASIC4.11□□□□□ -1.75
SDC3O75056 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.11□□□□□ -1.75
SDC3O75056 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SDC3O75056 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.11□□□□□ -1.75
SDC3O75056 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.11□□□□□ -1.75
SDC3O75056 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SDC3O75056 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.11□□□□□ -1.75
SDC3O75056 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.11□□□□□ -1.75
SDC3O75056 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.11□□□□□ -1.75
SDC3O75056 CCDC58P3-201ENST00000590792 430 ntBASIC4.11□□□□□ -1.75
SDC3O75056 ZNF92P2-201ENST00000600543 1059 ntBASIC4.11□□□□□ -1.75
SDC3O75056 RPL7P50-201ENST00000600588 727 ntBASIC4.11□□□□□ -1.75
SDC3O75056 AL606490.9-201ENST00000603331 271 ntBASIC4.11□□□□□ -1.75
SDC3O75056 AC005034.4-201ENST00000603612 899 ntBASIC4.11□□□□□ -1.75
SDC3O75056 AC099669.2-201ENST00000616549 437 ntBASIC4.11□□□□□ -1.75
SDC3O75056 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.11□□□□□ -1.75
SDC3O75056 MIR7154-201ENST00000620673 73 ntBASIC4.11□□□□□ -1.75
SDC3O75056 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SDC3O75056 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.11□□□□□ -1.75
SDC3O75056 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.11□□□□□ -1.75
SDC3O75056 OR8B1P-202ENST00000641132 1178 ntBASIC4.11□□□□□ -1.75
SDC3O75056 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SDC3O75056 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SDC3O75056 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms