Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 AC111000.2-201ENST00000507775 550 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC011352.1-201ENST00000512300 793 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 RAB9BP1-201ENST00000519581 626 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 HMGB1P1-201ENST00000522557 636 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC134698.4-201ENST00000523451 826 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 SMARCE1P4-201ENST00000523647 241 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 AC023161.2-201ENST00000551218 780 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC008015.1-201ENST00000555505 465 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.67□□□□□ -1.66
SMAD6O43541 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.67□□□□□ -1.66
SMAD6O43541 AC084783.1-201ENST00000565846 910 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC069061.3-201ENST00000582254 823 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 MTND3P19-201ENST00000603825 345 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 MIR8069-1-201ENST00000616627 86 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 AC123767.1-202ENST00000620407 817 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 MIR8069-2-201ENST00000621412 86 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC103706.2-201ENST00000638080 240 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 AL592148.3-201ENST00000608771 2646 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 MTND5P11-201ENST00000511037 1812 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 AL359922.3-201ENST00000624779 1670 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC107068.1-201ENST00000563286 4218 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SMAD6O43541 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SMAD6O43541 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 AL022322.2-201ENST00000624072 20397 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 MT-TP-201ENST00000387461 68 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 U3.22-201ENST00000391120 215 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AL592291.1-201ENST00000403830 352 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AL136310.1-201ENST00000404926 654 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 PTP4A1P5-201ENST00000420305 455 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AC234781.2-201ENST00000426370 994 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 AC093716.1-201ENST00000435923 377 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.66□□□□□ -1.66
SMAD6O43541 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 EEF1A1P39-201ENST00000440791 250 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 MTND1P1-201ENST00000445453 368 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 PTENP1-201ENST00000447117 1215 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AL627224.1-201ENST00000448334 444 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.66□□□□□ -1.66
SMAD6O43541 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 BUD31P2-201ENST00000449374 300 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 CYCSP42-201ENST00000450823 238 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 ISCUP1-201ENST00000454451 448 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.66□□□□□ -1.66
SMAD6O43541 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.66□□□□□ -1.66
SMAD6O43541 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 RPL7AP52-201ENST00000458096 790 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 RPS4XP6-201ENST00000477670 797 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AC020890.1-201ENST00000491837 504 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 RPS27AP16-201ENST00000492222 470 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 RPF2P2-201ENST00000504693 896 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SMAD6O43541 IGHV3-63-201ENST00000518422 341 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMAD6O43541 MTCO1P49-201ENST00000523429 802 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.66□□□□□ -1.66
SMAD6O43541 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SMAD6O43541 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.66□□□□□ -1.66
SMAD6O43541 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.66□□□□□ -1.66
SMAD6O43541 AL391156.1-201ENST00000554965 554 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.66□□□□□ -1.66
SMAD6O43541 AC023813.2-201ENST00000564321 469 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AC015912.2-201ENST00000571053 181 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 MIR5096-201ENST00000583713 70 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AC008782.1-201ENST00000603386 430 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 AC019193.2-201ENST00000610012 634 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 RMST_10.1-201ENST00000616309 154 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 AL121895.2-201ENST00000619558 447 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.66□□□□□ -1.66
SMAD6O43541 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.66□□□□□ -1.66
SMAD6O43541 AC139713.2-214ENST00000642059 1811 ntBASIC4.66□□□□□ -1.66
SMAD6O43541 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms