Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC027369.5-201ENST00000533838 755 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AL049779.2-201ENST00000553847 315 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.97□□□□□ -1.61
PROM1O43490 GTF2IP8-201ENST00000560687 584 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.97□□□□□ -1.61
PROM1O43490 AC074051.3-201ENST00000570238 358 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AL121834.1-201ENST00000572284 509 ntBASIC4.97□□□□□ -1.61
PROM1O43490 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.97□□□□□ -1.61
PROM1O43490 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.97□□□□□ -1.61
PROM1O43490 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.97□□□□□ -1.61
PROM1O43490 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.97□□□□□ -1.61
PROM1O43490 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 AC108747.1-201ENST00000609508 535 ntBASIC4.97□□□□□ -1.61
PROM1O43490 Mico1.1-201ENST00000611698 204 ntBASIC4.97□□□□□ -1.61
PROM1O43490 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.97□□□□□ -1.61
PROM1O43490 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.97□□□□□ -1.61
PROM1O43490 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 CYP4F35P-202ENST00000636121 390 ntBASIC4.97□□□□□ -1.61
PROM1O43490 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.97□□□□□ -1.61
PROM1O43490 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 AL731566.1-201ENST00000620490 1937 ntBASIC4.97□□□□□ -1.61
PROM1O43490 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.97□□□□□ -1.61
PROM1O43490 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PROM1O43490 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.97□□□□□ -1.61
PROM1O43490 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PROM1O43490 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.97□□□□□ -1.61
PROM1O43490 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.96□□□□□ -1.62
PROM1O43490 AP001642.1-201ENST00000624727 2117 ntBASIC4.96□□□□□ -1.62
PROM1O43490 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
PROM1O43490 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.96□□□□□ -1.62
PROM1O43490 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 Y_RNA.408-201ENST00000383987 102 ntBASIC4.96□□□□□ -1.62
PROM1O43490 MIR16-1-201ENST00000385271 89 ntBASIC4.96□□□□□ -1.62
PROM1O43490 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.96□□□□□ -1.62
PROM1O43490 SLC35E1P1-201ENST00000419313 864 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.96□□□□□ -1.62
PROM1O43490 AL009174.1-201ENST00000426577 416 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AL050321.1-201ENST00000432363 400 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AL161722.2-201ENST00000434731 981 ntBASIC4.96□□□□□ -1.62
PROM1O43490 RPS25P9-201ENST00000435591 252 ntBASIC4.96□□□□□ -1.62
PROM1O43490 RPL12P46-201ENST00000436610 195 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AL772161.1-201ENST00000439130 476 ntBASIC4.96□□□□□ -1.62
PROM1O43490 RPL23AP35-201ENST00000451906 501 ntBASIC4.96□□□□□ -1.62
PROM1O43490 ZNF114P1-201ENST00000453500 292 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.96□□□□□ -1.62
PROM1O43490 SUMO2P2-201ENST00000456482 255 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AC079841.1-201ENST00000481228 950 ntBASIC4.96□□□□□ -1.62
PROM1O43490 RPS4XP1-201ENST00000482189 787 ntBASIC4.96□□□□□ -1.62
PROM1O43490 RPS21P4-201ENST00000487122 248 ntBASIC4.96□□□□□ -1.62
PROM1O43490 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.96□□□□□ -1.62
PROM1O43490 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.96□□□□□ -1.62
PROM1O43490 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.96□□□□□ -1.62
PROM1O43490 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.96□□□□□ -1.62
PROM1O43490 MYL12BP2-201ENST00000503948 512 ntBASIC4.96□□□□□ -1.62
PROM1O43490 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 AC093281.2-201ENST00000510153 597 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AC079140.3-201ENST00000511111 550 ntBASIC4.96□□□□□ -1.62
PROM1O43490 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.96□□□□□ -1.62
PROM1O43490 EIF3KP3-201ENST00000514461 639 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.96□□□□□ -1.62
PROM1O43490 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.96□□□□□ -1.62
PROM1O43490 MTCYBP13-201ENST00000578634 1093 ntBASIC4.96□□□□□ -1.62
PROM1O43490 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.96□□□□□ -1.62
PROM1O43490 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.96□□□□□ -1.62
PROM1O43490 AC008814.1-201ENST00000603797 406 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.96□□□□□ -1.62
PROM1O43490 AP003973.1-201ENST00000604639 691 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.96□□□□□ -1.62
PROM1O43490 AL121612.2-201ENST00000612261 482 ntBASIC4.96□□□□□ -1.62
PROM1O43490 uc_338.9-201ENST00000617424 182 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AC090510.2-201ENST00000617465 629 ntBASIC4.96□□□□□ -1.62
PROM1O43490 AL031667.3-201ENST00000620124 655 ntBASIC4.96□□□□□ -1.62
PROM1O43490 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
PROM1O43490 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 AC006210.2-201ENST00000367074 1545 ntBASIC4.96□□□□□ -1.62
PROM1O43490 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PROM1O43490 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PROM1O43490 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
PROM1O43490 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
PROM1O43490 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PROM1O43490 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PROM1O43490 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms