Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MSI1O43347 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MSI1O43347 MIR129-1-201ENST00000384972 72 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 AC016397.1-201ENST00000412463 242 ntBASIC4.76□□□□□ -1.65
MSI1O43347 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.76□□□□□ -1.65
MSI1O43347 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MSI1O43347 MRPL48P1-201ENST00000445390 636 ntBASIC4.76□□□□□ -1.65
MSI1O43347 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 TPT1P13-201ENST00000449760 499 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 ISCUP1-201ENST00000454451 448 ntBASIC4.76□□□□□ -1.65
MSI1O43347 ATG12P2-201ENST00000456830 416 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.76□□□□□ -1.65
MSI1O43347 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 AC011979.1-201ENST00000472300 483 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
MSI1O43347 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.76□□□□□ -1.65
MSI1O43347 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 FABP5P12-201ENST00000515543 389 ntBASIC4.76□□□□□ -1.65
MSI1O43347 RNU6-1129P-201ENST00000515964 104 ntBASIC4.76□□□□□ -1.65
MSI1O43347 RNA5SP360-201ENST00000516555 118 ntBASIC4.76□□□□□ -1.65
MSI1O43347 Y_RNA.688-201ENST00000516565 95 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 MTND2P26-201ENST00000528255 1029 ntBASIC4.76□□□□□ -1.65
MSI1O43347 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MSI1O43347 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MSI1O43347 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.76□□□□□ -1.65
MSI1O43347 AC122134.1-201ENST00000565664 1104 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AC040904.1-201ENST00000590850 223 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.76□□□□□ -1.65
MSI1O43347 VN1R88P-201ENST00000596787 292 ntBASIC4.76□□□□□ -1.65
MSI1O43347 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MSI1O43347 AL133507.1-201ENST00000605269 557 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AL592148.3-201ENST00000608771 2646 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AC067852.7-201ENST00000623270 535 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AP000676.3-201ENST00000623299 569 ntBASIC4.76□□□□□ -1.65
MSI1O43347 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.76□□□□□ -1.65
MSI1O43347 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.76□□□□□ -1.65
MSI1O43347 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.76□□□□□ -1.65
MSI1O43347 AC087821.2-201ENST00000637086 450 ntBASIC4.76□□□□□ -1.65
MSI1O43347 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
MSI1O43347 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.76□□□□□ -1.65
MSI1O43347 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
MSI1O43347 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MSI1O43347 LINC01109-201ENST00000603837 3081 ntBASIC4.76□□□□□ -1.65
MSI1O43347 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.75□□□□□ -1.65
MSI1O43347 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.75□□□□□ -1.65
MSI1O43347 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 DDX18P4-201ENST00000511690 1966 ntBASIC4.75□□□□□ -1.65
MSI1O43347 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
MSI1O43347 RNU1-32P-201ENST00000363937 159 ntBASIC4.75□□□□□ -1.65
MSI1O43347 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.75□□□□□ -1.65
MSI1O43347 RNU6-225P-201ENST00000384613 103 ntBASIC4.75□□□□□ -1.65
MSI1O43347 MIR141-201ENST00000384975 95 ntBASIC4.75□□□□□ -1.65
MSI1O43347 MIR23A-201ENST00000385245 73 ntBASIC4.75□□□□□ -1.65
MSI1O43347 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MSI1O43347 RN7SKP247-201ENST00000411094 308 ntBASIC4.75□□□□□ -1.65
MSI1O43347 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.75□□□□□ -1.65
MSI1O43347 GAPDHP49-201ENST00000421421 961 ntBASIC4.75□□□□□ -1.65
MSI1O43347 RPL7AP25-201ENST00000423357 805 ntBASIC4.75□□□□□ -1.65
MSI1O43347 RPS12P10-201ENST00000427031 377 ntBASIC4.75□□□□□ -1.65
MSI1O43347 DNAJC19P7-201ENST00000428811 344 ntBASIC4.75□□□□□ -1.65
MSI1O43347 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.75□□□□□ -1.65
MSI1O43347 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.75□□□□□ -1.65
MSI1O43347 GTF2IP7-202ENST00000436677 309 ntBASIC4.75□□□□□ -1.65
MSI1O43347 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 MTND2P28-201ENST00000457540 1044 ntBASIC4.75□□□□□ -1.65
MSI1O43347 snoU13.1-201ENST00000459157 104 ntBASIC4.75□□□□□ -1.65
MSI1O43347 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.75□□□□□ -1.65
MSI1O43347 MRPS33P3-201ENST00000513456 322 ntBASIC4.75□□□□□ -1.65
MSI1O43347 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.75□□□□□ -1.65
MSI1O43347 AP000926.4-201ENST00000527351 454 ntBASIC4.75□□□□□ -1.65
MSI1O43347 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MSI1O43347 AC022882.1-201ENST00000532142 501 ntBASIC4.75□□□□□ -1.65
MSI1O43347 PDCL2P2-201ENST00000533651 189 ntBASIC4.75□□□□□ -1.65
MSI1O43347 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.75□□□□□ -1.65
MSI1O43347 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.75□□□□□ -1.65
MSI1O43347 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.75□□□□□ -1.65
MSI1O43347 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.75□□□□□ -1.65
MSI1O43347 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.75□□□□□ -1.65
MSI1O43347 AP005119.2-201ENST00000579735 1105 ntBASIC4.75□□□□□ -1.65
MSI1O43347 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.75□□□□□ -1.65
MSI1O43347 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.75□□□□□ -1.65
MSI1O43347 AC008782.1-201ENST00000603386 430 ntBASIC4.75□□□□□ -1.65
MSI1O43347 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.75□□□□□ -1.65
MSI1O43347 AC080013.6-201ENST00000606185 215 ntBASIC4.75□□□□□ -1.65
MSI1O43347 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms