Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
RTCAO00442 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 RPS16P5-201ENST00000406501 404 ntBASIC4.28□□□□□ -1.72
RTCAO00442 RN7SKP199-201ENST00000410325 305 ntBASIC4.28□□□□□ -1.72
RTCAO00442 RNU6-272P-201ENST00000411028 104 ntBASIC4.28□□□□□ -1.72
RTCAO00442 UQCRBP1-201ENST00000421129 336 ntBASIC4.28□□□□□ -1.72
RTCAO00442 RPL7AP25-201ENST00000423357 805 ntBASIC4.28□□□□□ -1.72
RTCAO00442 RPEP3-201ENST00000425462 676 ntBASIC4.28□□□□□ -1.72
RTCAO00442 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.28□□□□□ -1.72
RTCAO00442 AC011753.3-201ENST00000443436 406 ntBASIC4.28□□□□□ -1.72
RTCAO00442 RPL23AP43-201ENST00000446445 471 ntBASIC4.28□□□□□ -1.72
RTCAO00442 ARL2BPP10-201ENST00000446487 531 ntBASIC4.28□□□□□ -1.72
RTCAO00442 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 BX248409.1-201ENST00000455497 255 ntBASIC4.28□□□□□ -1.72
RTCAO00442 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.28□□□□□ -1.72
RTCAO00442 AC093720.1-201ENST00000505681 714 ntBASIC4.28□□□□□ -1.72
RTCAO00442 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.28□□□□□ -1.72
RTCAO00442 MTCO3P27-201ENST00000514397 196 ntBASIC4.28□□□□□ -1.72
RTCAO00442 AP003355.1-201ENST00000518956 587 ntBASIC4.28□□□□□ -1.72
RTCAO00442 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.28□□□□□ -1.72
RTCAO00442 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.28□□□□□ -1.72
RTCAO00442 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.28□□□□□ -1.72
RTCAO00442 AP003717.3-201ENST00000544832 1180 ntBASIC4.28□□□□□ -1.72
RTCAO00442 AC095057.3-201ENST00000567102 1157 ntBASIC4.28□□□□□ -1.72
RTCAO00442 AC104072.1-201ENST00000568817 668 ntBASIC4.28□□□□□ -1.72
RTCAO00442 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 AP002360.3-201ENST00000607673 710 ntBASIC4.28□□□□□ -1.72
RTCAO00442 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.28□□□□□ -1.72
RTCAO00442 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.28□□□□□ -1.72
RTCAO00442 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.28□□□□□ -1.72
RTCAO00442 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 EOGT-210ENST00000615922 1931 ntBASIC4.28□□□□□ -1.72
RTCAO00442 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.28□□□□□ -1.72
RTCAO00442 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTCAO00442 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
RTCAO00442 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
RTCAO00442 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTCAO00442 MTND4P8-201ENST00000514997 1362 ntBASIC4.27□□□□□ -1.73
RTCAO00442 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
RTCAO00442 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
RTCAO00442 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.27□□□□□ -1.73
RTCAO00442 AC116096.1-201ENST00000566804 2314 ntBASIC4.27□□□□□ -1.73
RTCAO00442 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTCAO00442 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTCAO00442 AL132640.2-201ENST00000559968 1698 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC066616.2-201ENST00000559334 1481 ntBASIC4.27□□□□□ -1.73
RTCAO00442 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTCAO00442 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTCAO00442 MIR585-201ENST00000384887 94 ntBASIC4.27□□□□□ -1.73
RTCAO00442 DSTNP4-201ENST00000399472 474 ntBASIC4.27□□□□□ -1.73
RTCAO00442 HMGB3P19-201ENST00000403971 560 ntBASIC4.27□□□□□ -1.73
RTCAO00442 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.27□□□□□ -1.73
RTCAO00442 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.27□□□□□ -1.73
RTCAO00442 PTP4A1P5-201ENST00000420305 455 ntBASIC4.27□□□□□ -1.73
RTCAO00442 MTCYBP24-201ENST00000420387 1106 ntBASIC4.27□□□□□ -1.73
RTCAO00442 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.27□□□□□ -1.73
RTCAO00442 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.27□□□□□ -1.73
RTCAO00442 MTCO1P43-201ENST00000431831 488 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.27□□□□□ -1.73
RTCAO00442 AC044797.1-201ENST00000445744 679 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.27□□□□□ -1.73
RTCAO00442 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.27□□□□□ -1.73
RTCAO00442 AC012671.1-201ENST00000451912 203 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AL513533.1-201ENST00000453728 415 ntBASIC4.27□□□□□ -1.73
RTCAO00442 RPS27AP17-201ENST00000463344 455 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC010307.1-201ENST00000467206 836 ntBASIC4.27□□□□□ -1.73
RTCAO00442 GAPDHP36-201ENST00000480688 918 ntBASIC4.27□□□□□ -1.73
RTCAO00442 RPL31P13-201ENST00000484151 370 ntBASIC4.27□□□□□ -1.73
RTCAO00442 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.27□□□□□ -1.73
RTCAO00442 HPRT1P2-201ENST00000505250 544 ntBASIC4.27□□□□□ -1.73
RTCAO00442 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.27□□□□□ -1.73
RTCAO00442 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTCAO00442 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.27□□□□□ -1.73
RTCAO00442 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.27□□□□□ -1.73
RTCAO00442 RNU5A-7P-201ENST00000515979 116 ntBASIC4.27□□□□□ -1.73
RTCAO00442 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.27□□□□□ -1.73
RTCAO00442 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.27□□□□□ -1.73
RTCAO00442 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTCAO00442 CYCSP28-201ENST00000534284 321 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC137768.1-201ENST00000549998 553 ntBASIC4.27□□□□□ -1.73
RTCAO00442 ATP5J2P6-201ENST00000565203 266 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC069061.3-201ENST00000582254 823 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.27□□□□□ -1.73
RTCAO00442 BPIFA4P-203ENST00000603168 689 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AL160290.3-201ENST00000604869 165 ntBASIC4.27□□□□□ -1.73
RTCAO00442 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.27□□□□□ -1.73
RTCAO00442 AC012531.5-201ENST00000611375 151 ntBASIC4.27□□□□□ -1.73
RTCAO00442 AC023043.4-201ENST00000612081 449 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms