Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC093311.1-201ENST00000506586 2021 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU6-225P-201ENST00000384613 103 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 HMGB1P10-201ENST00000395823 563 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 MTCO2P1-201ENST00000424648 477 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AL358472.1-201ENST00000431295 329 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 RN7SL542P-201ENST00000467147 294 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 RPS4XP15-201ENST00000489210 795 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 VWA8P1-201ENST00000510889 176 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AC008694.2-201ENST00000517591 306 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 HMGB3P26-201ENST00000560051 582 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AC110743.1-201ENST00000584870 478 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AL391834.1-201ENST00000609609 560 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 MIR6868-201ENST00000611215 58 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 MIR8084-201ENST00000614105 89 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AC099669.2-201ENST00000616549 437 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 MIR7154-201ENST00000620673 73 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 ASNSP1-201ENST00000518311 1939 ntBASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NEDD8-MDP1E9PL57 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC016588.2-201ENST00000632484 3021 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 MTND5P11-201ENST00000511037 1812 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 RNA5SP502-201ENST00000362694 119 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU4-31P-201ENST00000384211 141 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL23AP48-201ENST00000406913 488 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 VN1R8P-201ENST00000407739 893 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 MTCO3P4-201ENST00000419236 787 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC023128.2-201ENST00000420880 1223 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 HMGB3P5-201ENST00000428894 612 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 MTCO3P21-201ENST00000430791 643 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AL512637.2-201ENST00000431287 1256 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AL035458.1-201ENST00000433096 585 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 TBCAP1-201ENST00000436520 327 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 RPS27P5-201ENST00000444247 244 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC044797.1-201ENST00000445744 679 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 CASP3P1-201ENST00000446037 609 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 Z95327.1-201ENST00000446082 482 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC069540.1-201ENST00000446320 988 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC022431.1-201ENST00000450941 438 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL7P48-201ENST00000461513 746 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC010469.1-201ENST00000463864 576 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 CCDC75P1-201ENST00000469247 791 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 MTCO2P9-201ENST00000503214 694 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC112206.4-201ENST00000515142 405 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 RN7SKP141-201ENST00000516167 338 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC069240.1-201ENST00000548774 375 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC104229.1-201ENST00000561364 255 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC074050.1-201ENST00000563247 211 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC114878.2-201ENST00000604863 1251 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AL592436.1-201ENST00000605135 558 ntBASIC4.17□□□□□ -1.74
NEDD8-MDP1E9PL57 AC011374.2-201ENST00000607135 526 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms