Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC018552.3-201ENST00000567416 561 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC011477.5-201ENST00000586571 259 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC006213.4-201ENST00000616184 634 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AL356489.2-201ENST00000566968 3528 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC087565.3-202ENST00000642085 1603 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC073073.2-201ENST00000609827 2578 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 Z73965.1-201ENST00000623412 2297 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 MIR365B-201ENST00000362317 111 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 RNU6-283P-201ENST00000364788 107 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC068538.1-201ENST00000376856 336 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 RNA5SP105-201ENST00000391123 113 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 UBE2V1P15-201ENST00000407776 448 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC022022.1-201ENST00000430304 178 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 RPS29P31-201ENST00000446147 164 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 NUTF2P3-201ENST00000448540 384 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL162388.1-201ENST00000450912 352 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 RPS4XP15-201ENST00000489210 795 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC110792.1-201ENST00000491826 472 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 PRELID3BP7-201ENST00000503606 469 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 OR5AP1P-201ENST00000529730 940 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 OR8X1P-201ENST00000534542 869 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 MIR4697-201ENST00000582977 78 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 KLKP1-201ENST00000595979 403 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL354760.1-201ENST00000608357 643 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AL590410.1-201ENST00000617925 333 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AP000720.1-201ENST00000625091 483 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC091948.2-201ENST00000636510 279 ntBASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
TRIM49D1C9J1S8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 RNA5SP97-201ENST00000365006 84 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 CCNB2P1-201ENST00000399411 1150 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AL512504.1-201ENST00000415494 778 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 OR6K4P-201ENST00000423179 955 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 MTCO1P45-201ENST00000431457 267 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC091390.1-201ENST00000433904 331 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AL392003.1-201ENST00000434394 243 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 RN7SL385P-201ENST00000468873 276 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC108043.1-201ENST00000512696 574 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 VTA1P2-201ENST00000520205 911 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC022695.1-201ENST00000522089 237 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 MTND1P36-201ENST00000522384 936 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC090819.1-201ENST00000523800 1111 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 CYP2C60P-201ENST00000566088 139 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 TMF1P1-201ENST00000576058 373 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 MIR4738-201ENST00000579134 87 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC005776.1-201ENST00000603164 290 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC110741.2-201ENST00000605278 268 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 SNORA62.6-201ENST00000606322 83 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 RNU4-89P-201ENST00000607443 133 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AL356274.1-201ENST00000617064 410 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 AC253576.2-201ENST00000618815 580 ntBASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms