Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 Y_RNA.384-201ENST00000383909 102 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 DSTNP4-201ENST00000399472 474 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 RNU2-9P-201ENST00000410194 145 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC096632.1-201ENST00000427395 310 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC137499.1-201ENST00000427602 88 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 YWHAZP8-201ENST00000436935 731 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 DDX3P2-201ENST00000446138 111 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 SLC25A18P1-201ENST00000449385 454 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC093267.1-201ENST00000489176 961 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 RPS4XP14-201ENST00000493072 781 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC108693.1-201ENST00000496068 432 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 RNA5SP96-201ENST00000516041 107 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 Y_RNA.691-201ENST00000516611 103 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC126615.2-201ENST00000553003 515 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC092332.1-201ENST00000563684 829 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 MIR4312-201ENST00000579909 76 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC060780.2-201ENST00000589047 198 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC114477.1-201ENST00000605097 605 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 Z84480.1-201ENST00000605131 311 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC090948.1-201ENST00000607464 549 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 RNA5SP439-201ENST00000617595 124 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC068831.8-201ENST00000620171 435 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC015871.5-202ENST00000623252 701 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC005514.1-201ENST00000623521 208 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC022400.9-201ENST00000623633 273 ntBASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHISA3A0PJX4 AC114774.1-201ENST00000507410 1770 ntBASIC5.34□□□□□ -1.56
SHISA3A0PJX4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SHISA3A0PJX4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
SHISA3A0PJX4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.34□□□□□ -1.56
SHISA3A0PJX4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SHISA3A0PJX4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC006020.1-201ENST00000420179 1854 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 Y_RNA.255-201ENST00000364581 97 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RN7SKP191-201ENST00000364713 306 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RNU6-606P-201ENST00000384721 111 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC016769.3-201ENST00000396562 315 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 OR4K12P-201ENST00000406538 961 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 RPS7P15-201ENST00000415804 584 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC099670.2-201ENST00000435130 321 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AL450996.1-201ENST00000445574 1202 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC104651.2-201ENST00000447549 528 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC009244.1-201ENST00000450566 258 ntBASIC5.33□□□□□ -1.56
SHISA3A0PJX4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.33□□□□□ -1.56
SHISA3A0PJX4 MRPS17P3-201ENST00000465453 385 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms