Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 Y_RNA.559-201ENST00000384686 107 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 FABP12P1-201ENST00000401911 322 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RPS15AP38-201ENST00000413110 372 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL450992.3-201ENST00000413192 568 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC007559.1-201ENST00000428736 355 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 CBX1P4-201ENST00000439415 457 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL035551.1-201ENST00000446931 348 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 OR52J1P-201ENST00000450596 932 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL133244.1-201ENST00000456007 258 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC005008.1-201ENST00000456151 612 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RPL23AP12-201ENST00000467573 473 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SETP11-201ENST00000473027 690 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC015724.1-201ENST00000478577 156 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC012123.2-201ENST00000485809 248 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RPL7P51-201ENST00000490532 749 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SETP14-201ENST00000497538 873 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RN7SKP31-201ENST00000516354 278 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RNA5SP135-201ENST00000517019 125 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC092851.1-201ENST00000535964 478 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 DEFB131E-202ENST00000602581 683 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC020910.3-201ENST00000603701 874 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL390816.3-201ENST00000604527 1066 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL139286.2-201ENST00000606838 396 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC073348.1-201ENST00000623002 331 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC092656.1-203ENST00000624134 423 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC090582.1-201ENST00000636321 199 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL392088.2-201ENST00000637607 285 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC092104.1-201ENST00000497346 1441 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC083843.3-201ENST00000623679 2186 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL031595.2-201ENST00000624215 19071 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 RNU6-1066P-201ENST00000363573 105 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 RNA5SP151-201ENST00000365632 117 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 RNU1-106P-201ENST00000384382 164 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 Y_RNA.619-201ENST00000410951 90 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 GJA6P-201ENST00000415117 1042 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 RPS3AP44-201ENST00000425466 790 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL031663.1-201ENST00000437445 219 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 AL591363.1-201ENST00000450091 483 ntBASIC4.45□□□□□ -1.7
TRBV5-3A0A0A0MS03 DDX39BP2-208ENST00000453923 258 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms