Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 UBE2FP2-201ENST00000566646 462 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC091042.1-201ENST00000579213 173 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 MIR4801-201ENST00000582704 82 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 RBM11P1-201ENST00000604951 799 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC004223.4-201ENST00000612426 332 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC027514.1-201ENST00000588561 1603 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC002525.1-201ENST00000624392 1622 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 MIR192-201ENST00000384915 110 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 RAD23BP2-201ENST00000416003 1207 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC073136.2-201ENST00000417282 849 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC006366.1-201ENST00000422002 759 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC245028.1-201ENST00000423259 256 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC012519.1-201ENST00000424588 610 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 RPL21P43-201ENST00000425440 472 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AL591503.2-201ENST00000442314 1005 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 OR8A2P-201ENST00000528631 952 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 BNIP3P1-201ENST00000547295 580 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LSM3P2-201ENST00000551246 273 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AL359219.2-201ENST00000555184 348 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 ISCA1P3-201ENST00000577104 373 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 MIR4999-201ENST00000585029 91 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AC099842.1-201ENST00000619919 596 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 AL359740.1-201ENST00000624340 592 ntBASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CTDP1Q9Y5B0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC087359.1-201ENST00000508335 1740 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 RPS4XP9-201ENST00000405151 780 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 UBE2V1P10-201ENST00000414685 269 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 OR5AW1P-201ENST00000426334 1006 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 RPL12P46-201ENST00000436610 195 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC002542.1-201ENST00000440683 193 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 NPM1P49-201ENST00000448027 714 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 TPMTP4-201ENST00000450749 678 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 RPL7AP52-201ENST00000458096 790 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC006967.1-201ENST00000467608 589 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 RPL23AP37-201ENST00000479658 549 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC069304.1-201ENST00000491593 704 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 AC008897.1-201ENST00000494006 347 ntBASIC5.75□□□□□ -1.49
CTDP1Q9Y5B0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms