Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 BDP1P-201ENST00000582658 1990 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AL512646.1-201ENST00000269395 1077 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RN7SKP149-201ENST00000363008 344 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RNA5SP27-201ENST00000363839 119 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RNU6-650P-201ENST00000365658 111 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 MIR298-201ENST00000401212 88 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RN7SKP213-201ENST00000410746 298 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 PRELID3BP11-201ENST00000414230 479 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 SNRPFP1-201ENST00000414761 252 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RPL31P45-201ENST00000419532 356 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 USP12PY-201ENST00000427677 1064 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC093422.3-201ENST00000428506 305 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 ELOCP6-201ENST00000429066 328 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC087650.1-201ENST00000431445 468 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RPL37P1-201ENST00000432310 284 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AL359265.2-201ENST00000434367 631 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC096638.2-201ENST00000434965 711 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 FABP5P3-201ENST00000437960 408 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AL162151.2-201ENST00000448875 158 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 MRPL35P4-201ENST00000453682 566 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 CEACAMP4-201ENST00000457676 421 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 ELOCP12-201ENST00000458706 328 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RPL9P32-201ENST00000464118 620 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC053481.1-201ENST00000467217 306 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 RNA5SP92-201ENST00000516437 110 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC074029.1-201ENST00000552531 1044 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC012254.4-201ENST00000588843 273 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC022146.1-201ENST00000595307 847 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 PRO1804-201ENST00000623780 2050 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 AC010928.1-201ENST00000592477 1447 ntBASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KCNIP3Q9Y2W7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 MFSD8-213ENST00000641134 1327 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 AC046144.1-201ENST00000478559 1853 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 XPOTP1-201ENST00000443317 2398 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 U3.15-201ENST00000365398 212 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 SNORA37-201ENST00000384504 129 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 RN7SKP206-201ENST00000410823 293 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 ARF4P2-201ENST00000430209 526 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 AL035407.2-201ENST00000454090 378 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 RPL23AP81-201ENST00000455252 467 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 RPL21P103-201ENST00000479921 488 ntBASIC3.5□□□□□ -1.85
KCNIP3Q9Y2W7 RPSAP50-201ENST00000481955 852 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms