Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 PRELID3BP11-201ENST00000414230 479 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 E2F6P2-201ENST00000420708 748 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 CYCSP52-201ENST00000422857 310 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 C4BPAP2-201ENST00000428434 478 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 NDUFB1P2-201ENST00000449477 176 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 RNU7-182P-201ENST00000459009 62 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 RPL19P11-201ENST00000495944 589 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 HIGD1AP13-201ENST00000509878 289 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 TXNP6-201ENST00000510190 310 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC139493.1-201ENST00000604368 397 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AL138726.1-201ENST00000614873 333 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 ATP5A1P2-202ENST00000616464 443 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC007603.3-201ENST00000636915 979 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 CASC19-228ENST00000641414 1684 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AC061975.7-201ENST00000592016 2692 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AL139384.2-201ENST00000613809 3590 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 SNORD50.1-201ENST00000362987 71 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RNU6-115P-201ENST00000364310 107 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 SNORA64.3-201ENST00000365647 134 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RNU6-952P-201ENST00000391164 108 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 SNORD58.1-201ENST00000391313 66 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 MIR1303-201ENST00000408625 86 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RPL7AP51-201ENST00000422016 760 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 LINC00328-2P-201ENST00000436585 219 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RPL23AP89-201ENST00000439324 255 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AC019185.1-201ENST00000442718 389 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 Y_RNA.644-201ENST00000459006 113 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RN7SL413P-201ENST00000482700 297 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AC034222.1-201ENST00000494052 532 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RNU6-1278P-201ENST00000516130 107 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RNU6-479P-201ENST00000516348 105 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 Y_RNA.674-201ENST00000516362 113 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AL136097.3-201ENST00000611097 505 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AC005344.1-201ENST00000613391 459 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AP001264.1-201ENST00000620602 703 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AC089999.3-201ENST00000622440 577 ntBASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM35Q9UPQ4 AL122126.1-201ENST00000546905 1318 ntBASIC8.56□□□□□ -1.04
TRIM35Q9UPQ4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM35Q9UPQ4 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.56□□□□□ -1.04
TRIM35Q9UPQ4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC8.56□□□□□ -1.04
TRIM35Q9UPQ4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms