Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC124856.1-201ENST00000600819 896 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AL390838.2-201ENST00000602394 274 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AL133243.1-201ENST00000614487 366 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC121761.2-201ENST00000617300 689 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 OR52H1-202ENST00000641796 1061 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC012321.1-201ENST00000561622 1588 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC019072.1-201ENST00000604535 1551 ntBASIC5.24□□□□□ -1.57
COL20A1Q9P218 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL20A1Q9P218 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL20A1Q9P218 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL20A1Q9P218 AL049737.1-201ENST00000413920 1403 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL353743.4-201ENST00000422653 1547 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL391684.1-202ENST00000641293 1636 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 Y_RNA.192-201ENST00000363977 102 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 SNORD116-2-201ENST00000384274 95 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 SNORD116-6-201ENST00000384711 96 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 SNORD65.1-201ENST00000390889 71 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL450992.3-201ENST00000413192 568 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 PAICSP7-201ENST00000419829 962 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 MTND2P18-201ENST00000419962 1030 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 RPL7P53-201ENST00000421245 739 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 SEPT7P5-201ENST00000434048 306 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 RPL23AP93-201ENST00000440847 484 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC104306.1-201ENST00000449702 371 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 RPL5P24-201ENST00000463742 885 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 RPS23P7-201ENST00000466210 444 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 RPS27P23-201ENST00000487608 251 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC008885.2-201ENST00000509506 930 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 OR5H4P-201ENST00000510851 923 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 RNA5SP135-201ENST00000517019 125 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 FTH1P11-201ENST00000517577 551 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC087808.1-201ENST00000520501 361 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 LSM3P2-201ENST00000551246 273 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC008088.1-201ENST00000580993 280 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC013444.2-201ENST00000603317 787 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL137072.1-201ENST00000603444 466 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC090246.1-201ENST00000616499 426 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC015914.2-201ENST00000618167 288 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL731566.2-201ENST00000618971 317 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC026422.1-201ENST00000623961 452 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC108467.2-201ENST00000617640 1597 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.23□□□□□ -1.57
COL20A1Q9P218 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL20A1Q9P218 AC108751.5-201ENST00000492880 1336 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.23□□□□□ -1.57
COL20A1Q9P218 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.22□□□□□ -1.57
COL20A1Q9P218 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL20A1Q9P218 RNU6-839P-201ENST00000363347 108 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 MIR92A2-201ENST00000385299 75 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 RPL21P108-201ENST00000413857 481 ntBASIC5.22□□□□□ -1.57
COL20A1Q9P218 RPL6P29-201ENST00000414863 865 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms