Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CDH12P2-201ENST00000504393 298 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC034105.4-201ENST00000568304 277 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC068790.5-201ENST00000602741 355 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC006077.1-201ENST00000604746 343 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 AL135786.2-201ENST00000608422 615 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC083899.2-201ENST00000423285 1376 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 FAM35DP-201ENST00000323387 2712 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.85□□□□□ -1.79
CISHQ9NSE2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CISHQ9NSE2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CISHQ9NSE2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CISHQ9NSE2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CISHQ9NSE2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CISHQ9NSE2 SNORD9-201ENST00000362566 104 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 RNA5SP42-201ENST00000364278 115 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 RNU6-283P-201ENST00000364788 107 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 SNORA5A-201ENST00000384111 134 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AL391417.1-201ENST00000404100 426 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 NCSTNP1-201ENST00000406229 144 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.85□□□□□ -1.79
CISHQ9NSE2 IPMKP1-201ENST00000425988 855 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AL357520.1-201ENST00000441557 453 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 CDC27P1-201ENST00000445384 715 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AL133547.1-201ENST00000448546 220 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AC243772.1-201ENST00000451620 410 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.85□□□□□ -1.79
CISHQ9NSE2 AC005229.2-201ENST00000456995 399 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AC018635.1-201ENST00000468292 1030 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 NDUFB4P12-201ENST00000513465 390 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 TRMT10BP1-201ENST00000519377 943 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.85□□□□□ -1.79
CISHQ9NSE2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.85□□□□□ -1.79
CISHQ9NSE2 AC115621.1-201ENST00000604653 858 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.85□□□□□ -1.79
CISHQ9NSE2 CR392039.5-201ENST00000623201 510 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 CUL4AP1-201ENST00000514750 1863 ntBASIC3.85□□□□□ -1.79
CISHQ9NSE2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CISHQ9NSE2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CISHQ9NSE2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CISHQ9NSE2 AC011155.1-201ENST00000316512 456 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 SYF2P2-201ENST00000417620 583 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 AC114814.2-201ENST00000419195 485 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 CCDC75P1-201ENST00000469247 791 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 SAP18P1-201ENST00000512058 390 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 RNU6-579P-201ENST00000516879 102 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 AL121576.1-201ENST00000556055 276 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.84□□□□□ -1.79
CISHQ9NSE2 BMS1P21-201ENST00000634565 365 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 AC244205.2-202ENST00000635781 342 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 AC012442.3-202ENST00000636742 206 ntBASIC3.84□□□□□ -1.79
CISHQ9NSE2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CISHQ9NSE2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CISHQ9NSE2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC099063.2-201ENST00000446360 662 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC016687.1-201ENST00000482574 353 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 RPL23AP73-201ENST00000492507 471 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 FTH1P24-201ENST00000503502 462 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC104619.4-201ENST00000510773 249 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 RN7SKP18-201ENST00000516005 275 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 SNORA70.18-201ENST00000516696 98 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 PAICSP4-201ENST00000517543 1253 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 MED28P5-201ENST00000528254 438 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 AL121839.1-201ENST00000556233 1185 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 SNORD39.2-201ENST00000579995 76 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC020914.6-201ENST00000594327 272 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC069209.1-201ENST00000619282 651 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 AL627171.1-201ENST00000618845 1308 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms