Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.70-201ENST00000362886 110 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 SNORD115-47-201ENST00000391226 86 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 RPL17P50-201ENST00000396131 546 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC002524.1-201ENST00000411687 547 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 BX276092.6-201ENST00000430476 250 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 RPL7P29-201ENST00000437151 728 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC104634.1-201ENST00000452720 462 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 BX276092.8-201ENST00000455722 250 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC097484.1-201ENST00000471148 389 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 RN7SKP31-201ENST00000516354 278 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 OR5AK1P-201ENST00000524837 922 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AP000859.1-201ENST00000525536 307 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 PSMB7P1-201ENST00000556349 514 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC009117.1-201ENST00000563948 554 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 MIR4270-201ENST00000581799 70 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AL390838.2-201ENST00000602394 274 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AL137072.1-201ENST00000603444 466 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC108738.1-201ENST00000603703 237 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AL031320.1-201ENST00000604177 357 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC024560.3-201ENST00000608482 349 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 AC099654.6-201ENST00000636487 512 ntBASIC5.9□□□□□ -1.46
PDLIM7Q9NR12 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDLIM7Q9NR12 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDLIM7Q9NR12 IRF5P1-201ENST00000504852 2164 ntBASIC5.9□□□□□ -1.47
PDLIM7Q9NR12 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.9□□□□□ -1.47
PDLIM7Q9NR12 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDLIM7Q9NR12 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.9□□□□□ -1.47
PDLIM7Q9NR12 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 RN7SKP95-201ENST00000362860 303 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 RNU5D-1-201ENST00000363299 116 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 RNU5F-7P-201ENST00000363696 115 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 RNA5SP505-201ENST00000364748 108 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 NPM1P40-201ENST00000412758 733 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 USP9YP6-201ENST00000413550 854 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AL109913.1-201ENST00000421173 514 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AP001324.1-201ENST00000428553 399 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 VN1R10P-201ENST00000447106 875 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 USP9YP34-201ENST00000453983 808 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC068587.1-201ENST00000483613 781 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AL358832.1-201ENST00000497800 389 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC018442.3-201ENST00000523025 183 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC021006.3-201ENST00000530771 192 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 AL162431.4-201ENST00000604674 411 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 MTCO1P23-201ENST00000415223 1526 ntBASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM7Q9NR12 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM7Q9NR12 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms