Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AL122126.1-201ENST00000546905 1318 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 MAPK10-349ENST00000641767 3661 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 MIR513B-201ENST00000385136 84 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AL161909.1-201ENST00000397390 712 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 GLULP6-201ENST00000399502 913 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 MIR1178-201ENST00000408396 91 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC012519.1-201ENST00000424588 610 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AL627308.1-201ENST00000435693 821 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 Z73417.1-201ENST00000447373 778 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC026348.1-201ENST00000462549 1053 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 RPS3AP6-201ENST00000484430 795 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC021146.5-201ENST00000503544 545 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 SCARNA22-201ENST00000503991 125 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 BTF3P13-201ENST00000513224 490 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AP001189.2-201ENST00000527320 189 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 OR5AZ1P-201ENST00000527448 943 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AADACP1-206ENST00000561502 1193 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 BGLT3-201ENST00000564523 994 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AP001269.3-201ENST00000588718 329 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC022509.4-201ENST00000621404 572 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC097520.1-201ENST00000624435 385 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC026634.1-201ENST00000634369 198 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 MIR4496-201ENST00000635896 61 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 AC074029.4-201ENST00000624796 1859 ntBASIC4.53□□□□□ -1.68
BRF2Q9HAW0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
BRF2Q9HAW0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
BRF2Q9HAW0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.53□□□□□ -1.69
BRF2Q9HAW0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AL136164.3-201ENST00000624429 3978 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AL442639.1-201ENST00000625030 1899 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 SNORD65.1-201ENST00000390889 71 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 RNU6-1300P-201ENST00000391046 108 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 RNU6-1242P-201ENST00000391052 103 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC136624.1-201ENST00000400791 413 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 ZNF603P-201ENST00000405613 487 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 VDAC1P9-201ENST00000412766 841 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 OR2AM1P-201ENST00000422137 422 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 RPL21P43-201ENST00000425440 472 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 COX6CP15-201ENST00000426313 211 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 OR52J1P-201ENST00000450596 932 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC090142.1-201ENST00000465776 462 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 RN7SL214P-201ENST00000487317 265 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 KLRA1P-201ENST00000503499 986 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC091868.1-201ENST00000508746 304 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC021006.3-201ENST00000530771 192 ntBASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF2Q9HAW0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms