Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTFDC1Q9BY42 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC025031.4-201ENST00000621248 3271 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AL034370.1-201ENST00000397254 1590 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 SDHCP2-201ENST00000398565 501 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC013429.2-201ENST00000418798 781 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 PAICSP7-201ENST00000419829 962 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 MRPS36P1-201ENST00000421291 307 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 GTF2IP23-201ENST00000423746 351 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 MOB1AP1-201ENST00000430903 535 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 MTND1P26-201ENST00000440488 538 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 Z77249.1-201ENST00000444622 1175 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC093166.2-201ENST00000455969 1017 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC021660.1-201ENST00000465006 554 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 MTND6P6-201ENST00000478031 263 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 RN7SL810P-201ENST00000493031 276 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 RNU6-513P-201ENST00000516104 104 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AF279873.1-201ENST00000523393 313 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC005868.1-201ENST00000536421 331 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 NBEAP1-201ENST00000554452 979 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC022069.1-201ENST00000582910 658 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 BX005214.3-202ENST00000619809 325 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AL512506.2-201ENST00000624472 458 ntBASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTFDC1Q9BY42 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 FAM133CP-201ENST00000332869 704 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 TAF9BP1-201ENST00000396646 746 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 TMBIM7P-201ENST00000418074 855 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 RPS6P15-201ENST00000431996 751 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 NUTF2P3-201ENST00000448540 384 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC104306.1-201ENST00000449702 371 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 ANKRD26P4-201ENST00000455755 950 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 RPL21P126-201ENST00000470049 478 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC104763.1-201ENST00000475274 360 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC025164.1-201ENST00000496249 478 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 MTCO1P35-201ENST00000515270 228 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC105031.1-201ENST00000518550 476 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 OR4A2P-201ENST00000527276 913 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC006349.1-201ENST00000555526 235 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC025811.1-201ENST00000604312 472 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AL158163.2-201ENST00000619110 700 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AP002791.1-201ENST00000623291 381 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AP000843.1-201ENST00000624880 701 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 AC025125.1-201ENST00000624743 1922 ntBASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTFDC1Q9BY42 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms