Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 MAPK10-372ENST00000641954 3413 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 RN7SKP280-201ENST00000364196 304 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 RPL32P23-201ENST00000397237 405 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC025750.1-201ENST00000399891 379 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 HLFP1-201ENST00000402375 499 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 PPIAP31-201ENST00000405422 495 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AL389915.1-201ENST00000422463 466 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AL691449.1-201ENST00000426570 421 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC004069.2-201ENST00000505438 1114 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 CBX3P5-201ENST00000552017 521 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 MTND2P13-201ENST00000577438 1039 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AL137849.1-201ENST00000604767 169 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 SNORA62.6-201ENST00000606322 83 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 OR8B1P-202ENST00000641132 1178 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC095050.2-201ENST00000510748 1458 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 XIAPP3-201ENST00000312918 795 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 RNU6-213P-201ENST00000384051 104 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 U1.1-201ENST00000384101 164 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 NPM1P10-201ENST00000398310 865 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 RPL21P65-201ENST00000406094 466 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC108032.1-201ENST00000416706 207 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 VN1R31P-201ENST00000417498 730 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 RAB9AP5-201ENST00000437794 597 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 BTBD7P2-201ENST00000441962 620 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 RAB9AP2-201ENST00000443911 597 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 EIF2S2P4-201ENST00000461070 984 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 RPS7P7-201ENST00000463499 571 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 SAP18P1-201ENST00000512058 390 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 FTH1P21-201ENST00000512179 511 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 ACTR6P1-201ENST00000514311 1104 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 SNORA31.9-201ENST00000516429 84 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 AP002001.2-201ENST00000529025 1469 ntBASIC3.53□□□□□ -1.84
RSPO3Q9BXY4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
RSPO3Q9BXY4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.53□□□□□ -1.85
RSPO3Q9BXY4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 AL031985.3-201ENST00000565390 2449 ntBASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 AL627171.1-201ENST00000618845 1308 ntBASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 SNORA62.2-201ENST00000364672 152 ntBASIC3.52□□□□□ -1.85
RSPO3Q9BXY4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms