Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP88Q99567 AC079171.1-201ENST00000568788 914 ntBASIC5.57□□□□□ -1.52
NUP88Q99567 SNORA74C-1-201ENST00000580726 201 ntBASIC5.57□□□□□ -1.52
NUP88Q99567 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP88Q99567 AL451074.6-201ENST00000608512 729 ntBASIC5.57□□□□□ -1.52
NUP88Q99567 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP88Q99567 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP88Q99567 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP88Q99567 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP88Q99567 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP88Q99567 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP88Q99567 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
NUP88Q99567 STX3-208ENST00000641815 3236 ntBASIC5.57□□□□□ -1.52
NUP88Q99567 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP88Q99567 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP88Q99567 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NUP88Q99567 AL049737.1-201ENST00000413920 1403 ntBASIC5.57□□□□□ -1.52
NUP88Q99567 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP88Q99567 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP88Q99567 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
NUP88Q99567 AL731566.1-201ENST00000620490 1937 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP88Q99567 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP88Q99567 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP88Q99567 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP88Q99567 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP88Q99567 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP88Q99567 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NUP88Q99567 RNU6-1300P-201ENST00000391046 108 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.56□□□□□ -1.52
NUP88Q99567 AL356131.1-201ENST00000405826 414 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 RNU2-42P-201ENST00000410697 113 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 LINC00993-201ENST00000420453 540 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP88Q99567 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP88Q99567 RPS27AP15-201ENST00000447672 466 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP88Q99567 AL356981.1-201ENST00000454879 684 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 OR52A4P-201ENST00000472867 958 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 AC073073.1-201ENST00000493920 463 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.56□□□□□ -1.52
NUP88Q99567 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP88Q99567 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP88Q99567 RNU6-709P-201ENST00000517257 104 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 AP001189.2-201ENST00000527320 189 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 AL110118.1-201ENST00000553543 400 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 HIGD1AP17-201ENST00000554576 276 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 SERPINE4P-201ENST00000554978 281 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP88Q99567 AL390838.2-201ENST00000602394 274 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP88Q99567 MIR6758-201ENST00000620653 63 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP88Q99567 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP88Q99567 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP88Q99567 AC068620.4-201ENST00000636730 1182 ntBASIC5.56□□□□□ -1.52
NUP88Q99567 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NUP88Q99567 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP88Q99567 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP88Q99567 AC010329.2-201ENST00000595195 2737 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NUP88Q99567 AL603750.1-201ENST00000624216 1717 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP88Q99567 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
NUP88Q99567 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP88Q99567 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP88Q99567 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP88Q99567 RNU6-1066P-201ENST00000363573 105 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 SNORA70F-201ENST00000384142 135 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 SNORD116-2-201ENST00000384274 95 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 SNORD116-6-201ENST00000384711 96 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NUP88Q99567 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP88Q99567 RAP1BP1-201ENST00000412709 553 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AL161449.1-201ENST00000414531 1199 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 ATG4AP1-201ENST00000416893 538 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.55□□□□□ -1.52
NUP88Q99567 CENPIP1-201ENST00000425713 902 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 RPL37P1-201ENST00000432310 284 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP88Q99567 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 MTCO2P25-201ENST00000447065 681 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AL034418.1-201ENST00000448675 860 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 NDUFA5P7-201ENST00000452914 242 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 ART2BP-201ENST00000453501 499 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 snoU13.1-201ENST00000459157 104 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 RN7SL481P-201ENST00000477764 299 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 AC109445.1-201ENST00000512356 383 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 ENPP7P9-201ENST00000514456 627 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 RNU6-202P-201ENST00000515998 96 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 RN7SKP92-201ENST00000517266 244 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP88Q99567 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms