Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC119744.1-201ENST00000454746 1715 ntBASIC4.9□□□□□ -1.62
VPS50Q96JG6 AC114546.3-201ENST00000623582 1734 ntBASIC4.9□□□□□ -1.62
VPS50Q96JG6 HMGB1P5-201ENST00000255320 642 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 IL6STP1-201ENST00000346911 1020 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RNU6-146P-201ENST00000384602 108 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 MIR550A3-201ENST00000390735 95 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL035079.1-201ENST00000405210 287 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC019050.1-201ENST00000418508 492 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC098592.1-201ENST00000419352 333 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 MRPS36P1-201ENST00000421291 307 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 DPRXP1-201ENST00000426312 460 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 Z93242.1-201ENST00000427102 353 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 USP9YP31-201ENST00000431405 881 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RPS24P8-201ENST00000431490 402 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 RPL35AP21-201ENST00000437667 333 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL354941.1-201ENST00000438600 464 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 USP9YP22-201ENST00000438971 294 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RPL12P3-201ENST00000440080 396 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL357520.1-201ENST00000441557 453 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC104634.1-201ENST00000452720 462 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RFC5P1-201ENST00000454419 874 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 TPTE2P5-203ENST00000458118 728 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RN7SL189P-201ENST00000468631 289 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RN7SL826P-201ENST00000479724 288 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 GAPDHP36-201ENST00000480688 918 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC008953.1-201ENST00000497334 318 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC011352.3-201ENST00000505162 593 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 PGBD4P4-201ENST00000509673 613 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC006427.1-201ENST00000514359 712 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RNU6-347P-201ENST00000516658 105 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 RN7SKP147-201ENST00000517154 244 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC087808.1-201ENST00000520501 361 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 NPM1P6-201ENST00000521088 871 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AP001922.4-201ENST00000526967 290 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC005832.3-201ENST00000537929 631 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC004217.3-201ENST00000551552 878 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC116553.2-201ENST00000564203 463 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 MTCYBP33-201ENST00000575007 1130 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC090312.2-201ENST00000582687 378 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 VN1R90P-201ENST00000595717 726 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 NTAN1P1-201ENST00000603150 646 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC119501.1-201ENST00000603646 475 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AP004247.3-201ENST00000608682 624 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 LINC01739-205ENST00000641890 573 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 PANDAR-201ENST00000629595 1506 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC006971.1-201ENST00000407916 4486 ntBASIC4.9□□□□□ -1.63
VPS50Q96JG6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS50Q96JG6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VPS50Q96JG6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AL133243.3-201ENST00000617415 3004 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC007390.2-201ENST00000606229 3803 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 OR52B1P-201ENST00000316506 909 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 RN7SKP113-201ENST00000363891 295 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AL121834.1-202ENST00000404494 277 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 E2F6P2-201ENST00000420708 748 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 RPL12P34-201ENST00000424532 479 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms