Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 CYP1D1P-201ENST00000416662 1433 ntBASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 ZNF876P-202ENST00000398732 1485 ntBASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SCN4BQ8IWT1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC093535.2-201ENST00000624769 2326 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 RNA5SP447-201ENST00000363749 119 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 SNORA40.2-201ENST00000390847 128 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 MTND4P13-201ENST00000402078 1023 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC107081.1-201ENST00000414975 361 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 RPS27AP7-201ENST00000422792 455 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 RPL7AP25-201ENST00000423357 805 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 RPL18P10-201ENST00000425606 538 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AL009174.1-201ENST00000426577 416 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 MOB1AP1-201ENST00000430903 535 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 UBE2V1P5-201ENST00000440070 405 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC092809.1-201ENST00000441469 474 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 GTF3AP5-201ENST00000442645 697 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 MRPL42P4-201ENST00000453267 443 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 RPL21P126-201ENST00000470049 478 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC004263.1-201ENST00000479327 332 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC118282.2-201ENST00000508739 374 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 COX6B1P6-201ENST00000522347 255 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 MRPS36P5-201ENST00000551909 298 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC009852.2-201ENST00000567898 485 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 MIR4284-201ENST00000578924 81 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 PCNAP1-202ENST00000595299 752 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 VN1R78P-201ENST00000597393 564 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC008751.2-201ENST00000597885 980 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC091057.2-201ENST00000602594 792 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 NTAN1P1-201ENST00000603150 646 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AC092106.3-201ENST00000611308 722 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 AL121873.1-201ENST00000616013 524 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 MIR6758-201ENST00000620653 63 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 MFSD8-245ENST00000641743 948 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 USP9YP4-201ENST00000424401 1745 ntBASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4BQ8IWT1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 OR56B2P-202ENST00000641377 2453 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 RAD17P1-201ENST00000418130 2042 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 PCAT14-202ENST00000627127 3935 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC126755.2-208ENST00000327792 462 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC138969.1-213ENST00000331436 462 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 NACA3P-201ENST00000359690 648 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 OR1L1-202ENST00000373686 1083 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 MIR659-201ENST00000384963 97 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 RPL7P4-203ENST00000430239 730 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC233982.1-201ENST00000451247 436 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 MRPL35P4-201ENST00000453682 566 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms