Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC010683.1-201ENST00000473673 378 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC104763.1-201ENST00000475274 360 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC113420.1-201ENST00000507903 571 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 RN7SKP96-201ENST00000516948 297 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC023632.1-201ENST00000518463 375 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 PSMB7P1-201ENST00000556349 514 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC090948.2-201ENST00000607363 564 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC063944.3-201ENST00000609969 533 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AL023881.1-201ENST00000621088 301 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 RNA5SP196-201ENST00000625967 102 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR1L1-202ENST00000373686 1083 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 SNORA68.2-201ENST00000391263 128 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR51B3P-201ENST00000412287 913 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 RPL37P1-201ENST00000432310 284 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR4C10P-201ENST00000434991 931 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 ELOCP11-201ENST00000436690 332 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR10R1P-201ENST00000441524 1141 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 ELOCP16-201ENST00000444494 332 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 TDGF1P1-201ENST00000445734 527 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 Z95327.1-201ENST00000446082 482 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OFD1P3Y-201ENST00000453312 783 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 CCDC75P1-201ENST00000469247 791 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC104689.1-201ENST00000473356 768 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 SAP18P1-201ENST00000512058 390 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 MIR4429-201ENST00000580105 73 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 RN7SL435P-201ENST00000584418 282 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AL445435.1-201ENST00000604232 665 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC106052.1-201ENST00000608029 497 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 AC083843.3-201ENST00000623679 2186 ntBASIC5.03□□□□□ -1.6
HERC6Q8IVU3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HERC6Q8IVU3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC000367.1-201ENST00000452711 1766 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AL355852.1-201ENST00000454081 1771 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HERC6Q8IVU3 RNU4-68P-201ENST00000364314 141 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 MIR659-201ENST00000384963 97 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AL079342.2-201ENST00000403367 482 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 GSTA8P-201ENST00000404253 637 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 HNRNPDP2-201ENST00000406475 478 ntBASIC5.02□□□□□ -1.61
HERC6Q8IVU3 AC011998.1-201ENST00000433403 117 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms