Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 C8orf59P2-201ENST00000603441 271 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 TAS2R6P-201ENST00000605022 826 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AC112220.3-201ENST00000605502 502 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AP005137.2-201ENST00000609238 400 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC011815.3-201ENST00000624194 473 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 LINC01739-205ENST00000641890 573 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VRK3Q8IV63 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 NSRP1P1-201ENST00000444067 1693 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 MTND5P26-201ENST00000426018 1752 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC114947.2-201ENST00000565748 2125 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 ELF2P3-201ENST00000445099 1506 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC002525.1-201ENST00000624392 1622 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 SNURFL-201ENST00000309296 343 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 ENSAP3-201ENST00000312710 333 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 MIR181A1-201ENST00000385026 110 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 RPL17P50-201ENST00000396131 546 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 RPL21P67-201ENST00000402896 478 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 PIGPP2-201ENST00000411569 458 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 PTP4A1P1-201ENST00000420539 515 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 RPL7P30-201ENST00000420888 709 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC245054.1-201ENST00000420944 258 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC006065.1-201ENST00000422539 802 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 B3GNT2P1-201ENST00000434960 952 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 MTND1P28-201ENST00000435623 950 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 LARP1BP3-201ENST00000437229 869 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC005002.1-201ENST00000447458 540 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 NANOGNBP1-201ENST00000448444 480 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 PAXBP1P1-201ENST00000449315 447 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 RPS4XP12-201ENST00000461747 709 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 RN7SL443P-201ENST00000464331 290 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AL121769.1-201ENST00000469473 401 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC135999.1-201ENST00000478962 479 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 RPS4XP14-201ENST00000493072 781 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 IGBP1P5-201ENST00000507524 1000 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 MIR4528-201ENST00000577763 90 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 FGF7P1-201ENST00000582820 288 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 OR5H6-203ENST00000642105 978 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK3Q8IV63 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 ZNF733P-202ENST00000444809 1573 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 AC063976.2-201ENST00000425667 3556 ntBASIC4.99□□□□□ -1.61
VRK3Q8IV63 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
VRK3Q8IV63 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 DDX18P6-201ENST00000450119 1997 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 OR10J6P-201ENST00000289731 930 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 386.7 ms